Rattus norvegicus (rat): 362549
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Entry
362549 CDS
T01003
Symbol
Efcab7
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
362549 (Efcab7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
362549 (Efcab7)
Cilium and associated proteins [BR:
rno03037
]
Primary cilia and associated proteins
EVC complex
362549 (Efcab7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
AIF-1
EF_assoc_2
Dockerin_1
EFhand_Ca_insen
Motif
Other DBs
NCBI-GeneID:
362549
NCBI-ProteinID:
NP_001178795
RGD:
1561825
Ensembl:
ENSRNOG00000009782
UniProt:
D3ZZK0
LinkDB
All DBs
Position
5:119640841..119691566
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AA seq
628 aa
AA seq
DB search
MASNPGSDAALDTQKSVLSGSPRTKKFPLTEQEVFYMNCRAAYLTIFKSSLENIMSKDQL
YLALQHAGRNPSQKTINKYWTPQTAKLNFDDFCIILSKEKPTSKADLLKSFKQLDVNDDG
SILHSDLHKYLTKRGEKMTQEEVNAVISLADVNANGKFDYVKFCKLYMATSEQCLKTTLE
RLEADSKLRRQQFGSQMEGSPERDPSPVPKPSPRIIRKNDQETFSSKGDTSHTLLSTTRK
FKTSVSFTMPMSANSNRDSTLTEPNLKDWQCAQSRGCFFLEEDGEVVSHQYKMHIAQRSV
LYLTIKPLNLSQVEGKHSPWLSVDTALYILKKNENPAEAQLMCFTELRNREVFGWTGELE
PGIYWLIPSTTGCRLRKETKPVTEEVQLVHRDETGELSLTSEFRSTLSEIFEIIDLDGNG
LISLEEYNFFELRTSGEKCDEDAWAVCRENFDTKKNELTRQGFMDLHLMEANDREGDPLD
LWVTLHSMGYNTALELTEACPFVINVYAERCKPRIKAVHMEACSGQLERAICKSVLDRSN
AKVMDGYENIVVHTCNQDSWITSIIENKSDDKVIIHINNELSKNCVNNRGLNIFAVEVAP
RSTMVCQHVMPLNEEQEWIYCCVYSLVS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaatcctggaagtgatgcagctttggatactcagaagtcagtgctttcaggg
agtcctcgaacaaagaaattcccactaactgaacaggaggtattttatatgaattgtaga
gccgcctacttaaccatcttcaaaagcagcttggaaaacattatgtctaaagatcaactc
tacttagctcttcagcatgcaggaagaaatccatctcaaaagaccattaataagtattgg
actcctcaaactgccaaactaaattttgatgatttttgtataattttaagcaaggaaaaa
cctacttcgaaagcagacttactaaaatcatttaaacaattagatgtaaatgatgatggc
tctatcctacactctgaccttcataaatatctaaccaagagaggtgagaagatgactcag
gaagaagtaaatgctgtaataagtttggctgatgtaaatgctaatggaaagtttgactac
gttaagttttgtaaattatacatggcaaccagtgagcagtgtctcaagactacactagaa
agactggaggccgacagtaaactgaggcgtcaacagtttggaagccaaatggaagggtcc
cctgaaagggatccatcaccagtaccaaaaccatcacctaggatcataagaaaaaatgac
caagaaacgttctcaagcaaaggtgacacaagccacaccttactgtcaacaactagaaag
ttcaagacatctgtttccttcacaatgcctatgagcgctaacagtaaccgagactcaaca
ttaactgaaccaaacttaaaggattggcagtgtgcacaatcaagaggctgcttcttttta
gaggaagatggtgaagttgtcagtcatcagtacaaaatgcacatagctcagagatctgtg
ctttacctgacaattaagccattgaatctgagtcaagttgaaggaaaacattctccctgg
ttatcggttgatacagccttatatattcttaagaaaaatgagaatccagcagaggcacag
ctcatgtgttttaccgaactacgaaacagagaagtgtttggatggactggtgaactagaa
ccaggaatttattggctaattccttccacaactggatgtaggctaagaaaagaaacaaaa
ccagtaacagaagaagtccaacttgtacatagagatgaaacaggggaattatctcttaca
agtgagtttaggtcaactctatcagagatatttgaaataattgatttagatggcaatggt
cttattagccttgaagagtacaatttttttgagttgagaacaagtggtgaaaagtgtgat
gaggacgcttgggctgtctgcagagaaaactttgacacaaagaagaatgaattaacaaga
cagggctttatggacttgcatctaatggaagcaaatgaccgagaaggagaccctcttgac
ctgtgggtgactctacattccatgggctacaatacggctctggagctgacagaggcatgc
ccgtttgtcatcaatgtctatgcagaaaggtgcaagccaaggattaaagctgtgcatatg
gaggcatgcagtgggcagcttgagagggccatttgcaaatctgtccttgatagaagcaat
gctaaagtcatggatggctatgagaatatagtcgtgcacacttgcaatcaagactcatgg
ataacatcaattattgaaaataagtcagatgacaaagtgattattcacatcaacaatgaa
ctgagtaaaaactgtgtcaacaacagaggactcaacatctttgcagtagaagtggcacca
agatctacaatggtttgtcaacatgtaatgcccctgaatgaggaacaagaatggatatat
tgttgtgtgtattctcttgtatcttaa
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