Rattus norvegicus (rat): 362643
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Entry
362643 CDS
T01003
Symbol
Emc1
Name
(RefSeq) ER membrane protein complex subunit 1 precursor
KO
K23562
ER membrane protein complex subunit 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
362643 (Emc1)
Membrane trafficking [BR:
rno04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
ER membrane protein complex
362643 (Emc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC1_C
PQQ_2
PQQ
Beta-prop_WDR90_POC16_2nd
DUF2653
Kelch_1
Motif
Other DBs
NCBI-GeneID:
362643
NCBI-ProteinID:
NP_001102160
RGD:
1310427
Ensembl:
ENSRNOG00000018097
UniProt:
D4A994
A6ITM1
LinkDB
All DBs
Position
5:156891773..156917092
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AA seq
993 aa
AA seq
DB search
MAAAVESWFCLCAVLLVPAAAVYEDQVGKFDWRQQYVGKLKFASLEFSPGSKKLVVATEK
NVIAALNSRTGEILWRHVDKGTAEGAVDAMLVHGQDAITVSNGGRIMRSWETNIGGLNWE
ITLDSGSFQALGLVGLQETVRYVAVLKKTTLTLHHLSSGHLKWVEHLPESDSILYQMVYS
YGSGVVWALGIVPFSHVNIVKFNVEDGEIVQQVRVWTPWLQHLTGACGVVDEAVLVCPDP
SSHSLHTLALETEWELRQIPLQSPDLEFGSGFQPQVLPTQPSPVAPSRAQFFLQLSPGHY
ALLHYHHGAVTLLKNFPQATLVSFATTGEKTVAAVMTCRTEVQKPGSAGDGSVASFPETS
GAQDSLACFNQTYTINLYLVETGRRLLDTSISFSLEQKGTRPEQLYVQVFLKKDDSVGYR
ALVQTQDHLQLFLQQLAGKVVLWSREESLAEVVCLEMVDLPLTGAQAELEGEFGKKADGL
LGMFLKRLSSQLILLQAWTSHLWKMFYDARKPRSQIKNEINIDTLARDEFNLQKMMVMVT
ASGKLFGIESSSGTILWKQYLPNVKPDSSFKLMVQRTTAHFPHPPQCTLLVKDKETGMSS
LFVFNPIFGKWSQVAPPVLKRPILQSLLLPVMDQDYAKVLLLVDDEYKVTAFPATRNVLR
QLHELAPSIFFYLVDAEQGRLSGYRLRKDLTTELSWELIIPPEVQRVVQVKGKRSSEHVH
SQGRVMGDRSVLYKSLNPNLLAVVTESTDVHHERTFIGIFLIDGVTGRIIHSSVQKKARG
PVHLVHSENWVVYQYWNSKARRNELTALELYEGTEQYNATAFSSLDRPQLPQVLQQSYIF
PSSISAMEATITERGITSRHLLIGLPSGAILSLPKALLDPRRPEIPTEQSREENLIPYSP
DVQVHAERFINYNQTVSRMRGIYTAPSGLESTCLVVAYGLDIYQTRVYPSKQFDVLKDDY
DYVLISSVLFGLVFATMITKRLAQVKLLNRAWR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgtggagtcctggttctgcctctgtgctgtgctacttgtccctgcggcc
gcagtctacgaagaccaagtgggcaagtttgactggagacagcagtacgttgggaagctc
aagtttgcctccttggagttctcccctggatccaagaagttggttgtggccacagagaag
aatgtgattgcagcattgaattctcggactggagagattttgtggcgccatgttgacaag
ggtacagcagaaggggctgtggatgccatgctggtccatgggcaagatgcaatcactgta
tccaatggagggcgcatcatgcgttcttgggagactaacatcgggggcctgaactgggag
ataactctggacagtggcagtttccaggcactcgggctggtgggcctccaggagacagtg
aggtacgttgcggttctgaagaagacgaccctcactctccatcacctctctagtgggcac
ctgaagtgggtggagcatctgccagaaagtgacagcatcctctaccagatggtgtattcc
tacggctccggggtggtgtgggcccttggcatcgttcccttcagccatgtgaacatcgtc
aagtttaacgtggaggatggagagattgttcagcaggtcagggtttggaccccctggctg
cagcacctgactggagcctgtggtgttgtagacgaggctgtcctggtatgcccagacccc
agctcacattcgctccacactttggccctggagacggagtgggaactgcggcagatcccc
ctgcagtctcctgacttagaatttggaagtggattccagccccaagtgctgcccacgcag
cccagcccagtggctccttctcgggcccagttcttcctgcagttgtccccgggccactat
gctctactgcactaccaccacggcgccgtgactctgctcaaaaactttccccaggccaca
cttgtcagctttgctaccacaggggagaagacagtggctgcagtcatgacctgtcgcact
gaagtgcaaaaacctggcagtgctggagatgggtctgtggcgagcttccctgagacatct
ggtgcacaggactctctggcttgcttcaatcagacctacaccattaacctgtacttagta
gagacaggtcggcggctactagacacttcgatttccttcagcttggagcagaagggcact
cgacctgagcagctgtacgtccaggtgttcttgaagaaggatgactcggtgggctaccgg
gccttggtgcagacacaggaccatctgcagctgttcctgcagcagcttgccgggaaggtg
gtgttgtggagccgagaggagtccctggcagaagtcgtgtgcctggagatggtggatctc
cccctgactggggcacaggctgagctggaaggagaatttggcaagaaggcagatggcttg
ctggggatgttcctgaaacgcctgtcttcccagctcatcctgctccaggcctggacttcc
cacctctggaaaatgttctacgacgctcggaagccccgaagccagattaagaatgagatc
aacatcgacaccttggctagagatgagttcaacctgcagaaaatgatggtgatggtaaca
gcctcaggcaagctctttggcatcgagagcagctctggcaccattctgtggaaacagtat
ctgcccaatgttaagccggactcctcctttaagctgatggtccagaggactactgcccat
ttcccccacccgccccagtgcacgctgctggtgaaggacaaggaaacaggaatgagctct
ctgtttgtcttcaaccccatttttggcaagtggagtcaggtagctcccccagtgttgaag
cgccccatcctgcagtccttgcttctcccggtcatggatcaagactatgccaaggtgttg
ctgttggtggatgatgaatacaaggtcacagctttcccagctactcggaatgttttgcga
cagctacatgaacttgccccctccatcttcttctacttggtggatgccgagcaggggcgg
ctcagcgggtatcggcttcgcaaggatctcactacagaactgagttgggagctgatcatc
cccccagaagtgcaacgggtcgtccaggtgaaggggaagcgcagcagtgagcacgtgcac
tcccagggccgggtgatgggggatcgaagcgtgctctacaagagtctgaaccccaacttg
ctggctgtggtgacggagagcacggatgtccatcacgagcgcacctttattggcatcttc
ctcattgacggtgtcactggccgcattatccactcctctgtgcagaagaaggctaggggc
cctgtccaccttgtgcattcagagaactgggtggtgtaccagtactggaactctaaggct
cggcgcaatgagctgacggccctggagctctacgagggcactgagcagtacaatgccact
gccttcagctccctagaccgaccccagctgccccaggtcctccagcagtcctacatcttc
ccttcctccatcagtgccatggaggctaccatcaccgagcggggcatcaccagccggcac
ttgctcattgggctgccttctggagcaatcctttccctccccaaagccttgctggatccc
cggcgcccagagatcccaacagaacaaagcagagaagagaacctgatcccgtattcccca
gatgtccaggtccatgcagagcgattcatcaactataaccagacagtctctcgaatgcga
ggcatctatacagcgccctcaggcctggagtccacatgtttggttgtggcctatggtctg
gatatttaccaaactcgagtttacccatccaagcagttcgatgtcctgaaagatgactat
gactatgtgctcatcagcagtgtcctttttggcctggtttttgccaccatgatcacgaag
aggctggcacaggtgaaactcctcaatcgagcctggcggtaa
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integrated database retrieval system
