Rattus norvegicus (rat): 362700
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Entry
362700 CDS
T01003
Symbol
Spast
Name
(RefSeq) spastin isoform 2
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
362700 (Spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
362700 (Spast)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
362700 (Spast)
Membrane trafficking [BR:
rno04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
362700 (Spast)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
362700 (Spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
MIT
AAA_14
TniB
AAA_16
Mg_chelatase
IstB_IS21
DUF815
AAA_24
nSTAND3
AAA_2
DUF4368
Motif
Other DBs
NCBI-GeneID:
362700
NCBI-ProteinID:
NP_001102172
RGD:
1308494
Ensembl:
ENSRNOG00000027136
UniProt:
B2RYN7
LinkDB
All DBs
Position
6:complement(26807220..26858456)
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AA seq
581 aa
AA seq
DB search
MSSPAGRRKKKGSGGASPAPARPPPPAAVPAPAAGPAPAPGSPHKRNLYYFSYPLVVGFA
LLRLLACHLGLLFVWLCQRFSRALMAAKRSSGTAPAPASPSTPAPGPGGEAESVRVFHKQ
AFEYISIALRIDEEEKGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQAKMMT
NLVMAKDRLQLLESGAVPKKKDPLTHASNSLPRSKTVMKSGSTGLSGHHRAPSCSGLSMV
SGARPGSGPAATTHKGTSKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDN
GTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAV
AAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEH
DASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRL
LLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSAS
EMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccggccggacgacggaagaagaaaggctcaggcggcgcgagccccgcgccc
gccaggcctccgccccccgccgcggtccccgcccctgccgccggcccggcccctgcgccc
ggctcgccgcataagcggaacctgtattacttctcgtatccgctggtcgtcggcttcgcc
ctgctgcgcctgctggcctgccacctggggctcctcttcgtgtggctctgccagcgcttc
tcccgcgccctcatggccgccaagaggagctccgggaccgcgccggcgcccgcctcgccc
tcgactccagcccccggaccgggtggcgaggccgagagcgtccgcgtcttccacaagcag
gcctttgagtacatctccattgccctgcgcatcgacgaggaagagaaaggacagaaggaa
caagctgtggaatggtataagaaaggcatcgaagaactagagaaaggaatcgcggttata
gttacgggccaaggtgaacagtacgaaagagctagacgccttcaagccaaaatgatgacg
aatttggttatggctaaggaccgtttacaactcctagaaagtggagcagttccgaagaag
aaagaccccttaacacatgctagtaattcattgcctcgatcaaaaactgtcatgaaaagt
ggatccacagggctctccggtcaccacagggcgcctagttgcagtggtttatccatggtt
tctggagcaagaccgggatctggtcctgcagctaccacacataagggtacttcaaaacca
aatagaaccaacaaaccttctacacccacaactgcagttcggaaaaagaaagacttgaaa
aattttaggaatgtggacagcaatcttgctaaccttataatgaatgaaattgttgacaat
gggacagctgttaaatttgatgatatagctggtcaggaactggcaaaacaagcattgcaa
gagattgtcattctcccttctctgcggcctgagttgttcacagggctcagagctcccgcc
agaggcttgttactcttcggtccaccaggaaacggaaaaaccatgctggctaaagcagta
gctgcagaatctaatgcgacttttttcaatataagtgctgcaagtttaacttcaaaatat
gtaggagagggagagaaattggtgagagctctttttgctgtggctcgagaacttcaaccc
tctataatttttatagatgaagttgatagtcttttgtgtgagagaagagaaggggagcac
gatgctagtagacgactaaaaactgaatttttaatagaatttgatggtgtgcagtctgct
ggagatgacagagtcctcgtaatgggtgcaaccaacaggccccaagagctggatgaagct
gttctcaggcgtttcattaaacgggtgtatgtgtcattacccaatgaggagacacgacta
cttctacttaaaaacctgttatgtaaacaaggaagtccactgacccaaaaagaacttgct
caactggcgagaatgactgatggatactctggaagtgatctgactgctttggcaaaggat
gcagcactgggtcctatccgagaactgaaaccagagcaggtgaagaacatgtctgccagt
gagatgagaaatattcgattatctgacttcacagaatccttaaaaaagatcaaacgcagt
gtgagtcctcagactttagaagcatacatacgctggaacaaggactttggagacaccact
gtttaa
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