KEGG   Rattus norvegicus (rat): 362703
Entry
362703            CDS       T01003                                 
Symbol
Wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    362703 (Wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    362703 (Wdr43)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    362703 (Wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Utp12 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_SPT8 Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st UTP15_C Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD40_like NBCH_WD40 Tricorn_N
Other DBs
NCBI-GeneID: 362703
NCBI-ProteinID: NP_001032880
RGD: 1565005
Ensembl: ENSRNOG00000026316
UniProt: G3V920 A6HA21
LinkDB
Position
6:complement(29565610..29604954)
AA seq 674 aa
MAAGGGGSCDPLAPAGVPCAFSPDSQAYFALASSDGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKESHQRKKRKSEAIGTNDQADLLALGTAVGSILLYSTVKGELHSKL
ISGGHEKRVNCIQWHQDNDCLYSCSDDKYIVEWSTQMCRVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLRFTTIRPNESQPFDGVTGLYFLSGAV
HDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFEH
VLNGHCKKPLTSNCTIQVATPGKGKKATPKPIPILAAGFCLDKMSLLLVYGSWFQPTIER
LALNSKDTHICLERDISNCWAPTVETAITKVKTPVMNSEAKVLVPGVPGHHAPIKLLPAQ
PKEAENKRKLGGKEATIEERLGAMDLDRRGKKDDLLQTNSFPVLLAQGLESNDFEMLNKV
LQTRNVNLIKKTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTIHASYLSTL
PDLVHQLGTLYQLMESRVKTFQKLSHLHGKLILLVTQVTASEKTKKMPSPGLKAKLVYEE
ESSEEESDDEIPEKDSDDNWDEDEEKDSENDEAVDEDSENDEAVDEEDEDREAASEKELN
GDSDLDPENESEEE
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggcggccggtggcggcggtagctgcgaccccttggccccggcgggggtcccctgcgcc
ttctcgccggacagtcaagcctacttcgctttagcctctagcgacggtcacttgcgggtg
tgggagacagctaacaaccggctgcaccaggagtacgtgccttccgcgcacctaagcggt
acctgcacctgcctggcctgggcgccagcccggctgcaggccaaggaaagtcatcaaagg
aaaaaaaggaaatcagaagctataggaacgaatgaccaggctgacttgttggctcttggt
acagcagttggtagcattttattgtatagcacagtaaaaggagagttgcacagtaaatta
ataagtggtgggcatgaaaaaagagtcaattgcatacagtggcatcaagacaatgactgc
ctgtatagttgttcagatgataagtacattgtggagtggagtacacagatgtgcagagtg
aagtgcaaatggaaaggagacaatagcagcgtcagttccctgtgtatcagcccagatgga
aagatgttactttcagctggtcgaacaatcaaactatgggttttggagaccaaagaagtc
tacagacacttcacaggacacgcaacacctgtttcatcgcttaggttcacgaccatcaga
cctaacgagagccagccttttgatggggttacaggcctttactttctgtctggagctgta
catgaccgattacttaatgtctggcaggtccggtcagagaacaaagagaagagtgcagtg
atgtcttttacagtcacagatgagccagtctatattgacttgaccttgtcagaaaacaaa
gaagagcctgtcaagttagctgttgtttgcagagatggtcaagttcatctgtttgaacac
gtattaaatggacactgcaaaaagcccttgacttcaaattgcacaattcaggtggcaaca
cctggaaagggcaagaaggcaacaccaaagcccatccctattctagctgctggcttttgc
ttagacaaaatgtccttactgcttgtgtatggcagttggtttcaacctaccatcgagcga
ctggctttgaactccaaagatactcatatatgtttggaaagagacatttcaaattgctgg
gctccaacagtagaaactgctataaccaaggtgaaaacaccggtaatgaattccgaagca
aaagtcttggtgcctggggttcctggacatcatgctccaatcaagctgctgcctgcccag
cccaaagaggcggagaacaagaggaaactgggcggtaaagaggctaccatcgaggagcgc
cttggtgccatggatctagatagaagaggaaagaaggatgaccttttgcagacaaacagc
tttccagtccttctcgcgcagggcttagaaagcaatgactttgaaatgttaaataaagtg
cttcaaactaggaatgtaaacctgataaagaagactgtgctgaggatgcccttgcatgct
gtcatcccactgctgcaggagcttacgaagaggctgcagggacatcccaatagtgctgtt
ttaatggtccagtggctgaagtgtgtgctgacgattcatgcgtcatacctgtccacgctg
cctgacctggtgcaccagttgggaacactctaccagctaatggaaagcagagtcaaaact
ttccagaagctctcacacctgcatgggaagctcattcttctcgtcacgcaagttacagca
tcagaaaagacgaaaaaaatgccctcccctggacttaaggcaaaattggtgtatgaagaa
gagtcttctgaagaggagtctgacgatgaaattccagagaaggattctgatgataattgg
gatgaggatgaagagaaagacagtgagaatgatgaggctgtcgacgaagacagtgagaat
gatgaggctgtcgacgaggaagatgaggacagagaagcggcgagtgagaaagagttgaat
ggagattcggatttagatcctgaaaatgagagtgaagaagagtga

DBGET integrated database retrieval system