KEGG   Rattus norvegicus (rat): 362829
Entry
362829            CDS       T01003                                 
Symbol
Lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform 1
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    362829 (Lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    362829 (Lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    362829 (Lsm7)
   03041 Spliceosome [BR:rno03041]
    362829 (Lsm7)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     362829 (Lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     362829 (Lsm7)
Spliceosome [BR:rno03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    362829 (Lsm7)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 362829
NCBI-ProteinID: NP_001102202
RGD: 1305354
Ensembl: ENSRNOG00000019552
UniProt: A6K8E6
LinkDB
Position
7:9507373..9509787
AA seq 103 aa
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQQQDT
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggacaaagagaaaaagaagaaagaaagcatcttggacctgtccaagtatattgat
aagaccattcgagtcaagttccagggtggccgggaagccagcggcatcctgaaagggttt
gacccactgctcaacctggtgctggatgggaccattgaatacatgcgagaccccgatgac
cagtacaagctgacagaggacactcggcagctggggctcgtagtgtgccgtggcacctcg
gtggtgctcatctgcccgcaggatggcatggaggccatccctaacccctttgtgcagcag
caggacacttag

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