Rattus norvegicus (rat): 362873 Help Entry 362873            CDS       T01003                                  Symbol Plxnc1 Name (RefSeq) plexin-C1 precursor   KO K06572   plexin C Organism rno  Rattus norvegicus (rat) Pathway rno04360   Axon guidance Brite KEGG Orthology (KO) [BR:rno00001]  09150 Organismal Systems   09158 Development and regeneration    04360 Axon guidance     362873 (Plxnc1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04090 CD molecules [BR:rno04090]     362873 (Plxnc1) CD molecules [BR:rno04090]  Proteins   362873 (Plxnc1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Plexin_cytopl Plexin_RBD PSI TIG Sema TRP Motif Other DBs NCBI-GeneID:  362873 NCBI-ProteinID:  NP_001413917 RGD:  1307420 Ensembl:  ENSRNOG00000007970 LinkDB All DBs Position 7:complement(31276978..31430823) Genome browser AA seq 1574 aa AA seqDB search MEVSRRKAPPRPPYPAAPLPLIAYLLALAVPARGADEPVWRSEQAIGAIAASRADGVFVA SGSCLDQLDYSLKNRLSRLYRDQAGNCTEPVSLAPPARPRPGSSFSKLLLPYREGATGLE GLLLTGWTFDRGACEVRPLGNLNRSSLRNGTEVVSCHPQGSTAGVVYRASGTDLWYLAVA ATYVLPEPETANRCNPAASDRDTAIALKNTEGRSLATQELGRLKLRGSAGSLHFVDAFLW NGSVYFPYYPYNYTSGAATGWPSMARIAQSTEVLFQGQAALDCGHGHPEGRRLLLSSSLV EAVDIWAGVFSAATGEGQEKRSPATTALCLFRMSEIQARARSCSWDFQATEHNCKEGDQP EQVQPIASSTLIHSDLTSVYGTVVMNRIVLFLGTGDGQLLKVVLGENLTSNCPEVIYEIK EETPVFYKLVPHPVKDTYIYLTAGKEVRRIQVANCSKRKSCFQCLAAADPHCGWCLPLQR CTFQGDCTHAGSFENWLDISSGPKKCPKIQIIRSLRERTTVTIVGSVSARHSECVVKNAD TGKLLCQGRSQMNRTCACNIPSRPSNNVFVVNATFTFPSWSVSERFNFTNCASVRECPAC IETGCAWCKRDKRCIHPFTPCEPSDYERNQELCHVAVEKPPKDSGGGRVKESKRNRTDPA LQVFYIKAIEPQKISTLGKSNVIVTGANFTQASNITMILRGTSTCEKDVIRVSHVLNDTH MKFSLPSSRKEMKDVCIQFDGGNCSSAGALSYIALPHCSLIVPATTWISGGQNITIMGRN FDVIDNLIISHELKGNINVSINVSEYCMATSCRFLAPNLKSSKGRTNVVVKLRVQDTYLD CGTLQYLEDPRFTGYRVESEIDTELEVKIQKENDNFNISRDDIDITLFHGENKQFNCSFE NITRNQDLTTILCKIKSIKNANTIATSSKKVRVKLGNLELYVEQESVPSTWYFLIALPIL LAIVIVVAVVVTRHKSKELSRKQSQQLELLESELRKEIRDGFAELQMDKLDVVDSFGTVP FLDYKHFALRTFFPESGGFTHIFTEDMHNRDANDKNESLTALDALICNKSFLVTVIHTLE KQKNFSVKDRCLFASFLTIALQTKLVYLTSILEVLTRDLMEQCSNMQPKLMLRRTESVVE KLLTNWMSVCLSGFLRETVGEPFYLLVTTLNQKINKGPVDVITCKALYTLNEDWLLWQVP EFNTVALNVVFEKIPENESADVCRNISVNVLDCDTIGQAKEKIFQAFLSKNGSPYGLQLN EIGLELQVGTRQKELLDIDSSSVILEDGITKLNTIGHYEISNGSTIKVFKKIANFTSDVE YSDDHCHLILPDSEAFQVVQGKRHRGKHKFKVKEMYLTKLLSTKVAIHSVLEKLFRSIWS LPNSRAPFAIKYFFDFLDAQAENKKITDPDVVHIWKTNSLPLRFWVNILKNPQFVFDIKK TPHIDSCLSVIAQAFMDAFSLTEQQLGKEAPTNKLLYAKDIPTYKEEVKSYYKAIRDLPP LSSLEMEEFLTQESKKHENEFNEEVALTEIYKYIVKYFDEILNKLERERGLEEAQKQLLH VKVLFDEKKKCKWM NT seq 4725 nt NT seq  +upstreamnt  +downstreamnt atggaggtctcccggaggaaggcgccgccgcgccccccgtaccctgccgcaccgctgccc ctgatcgcctatctgctggcactggcggttcccgcccggggcgcggacgagccggtgtgg cgatctgagcaagccatcggagccatagcggcgagccgagcggacggcgtgttcgtggcg agcggcagctgcctggaccagctggactacagcctgaagaacaggctctcccgcctatac cgggaccaagcgggcaactgcaccgagcctgtctcgttggcgccccccgcgcggccccgg cccgggagcagcttcagcaagctgctattaccctaccgcgagggggcgaccggtctcgag gggctgctgctcaccggctggaccttcgaccggggcgcctgcgaggtgcggcccttgggc aaccttaaccgcagctccctgcgcaacggcaccgaggtggtgtcgtgtcacccgcagggc tcgacggccggtgtggtgtaccgcgcgagtggcaccgatctctggtacctggcggtagcc gccacctatgtgctgccggagccggagaccgcgaatcgctgcaaccccgcggcatctgat cgcgacacggccatcgcgctcaagaacacggaggggcgcagtctggccacgcaggagctg ggccgcctgaaactgcgcggtagtgcgggcagcctgcacttcgtggacgcctttctctgg aacggcagtgtctacttcccctactatccctacaactacacaagtggcgctgccaccggc tggcccagcatggcgcgcatcgcgcagagcacagaggtgctattccagggccaggcggcc ctcgattgcggccacggccaccccgagggccgccgcctgctgctttcctccagtctggtg gaggctgtggacatctgggccggcgtgttcagcgcggccactggagagggccaggagaag cgctcccccgccaccacggctctctgcctcttcaggatgagtgagatccaggcgcgcgcc aggagctgcagctgggactttcaggcgactgagcacaactgcaaagaaggggatcagcct gaacaggtccagccaatcgcatcgtcaacactgatccactctgacctgacgtctgtgtat ggcacggtggtgatgaacaggattgttctgttcttggggactggagacggccagttactt aaggttgttcttggagagaatttgacttcaaattgcccagaggttatctatgaaattaaa gaagaaacgcccgtgttctacaagctcgttcctcaccccgtgaaggacacctacatctac ctaacggctgggaaggaggtgagaagaattcaagttgcaaactgcagtaaacgtaaatcc tgtttccagtgcttagcagcggcagacccccactgtggctggtgcctcccgctacaaagg tgcacttttcaaggggattgcacacatgctgggagctttgaaaactggctggatatttca tcaggacctaagaaatgcccgaaaattcagataattcgaagcctccgagagaggaccaca gtgaccattgtgggaagcgtctctgcgagacactcggagtgcgtggtgaagaacgcagac acgggcaagctgctttgccaggggagaagccagatgaaccggacctgtgcctgcaacatc cctagcagacccagcaacaatgtctttgtcgtcaacgccaccttcacctttccatcttgg agcgtatcggaaagattcaacttcaccaactgcgcgtcagtgagagaatgcccagcatgt attgaaactggctgtgcttggtgtaaacgggacaaaagatgcatccatcccttcaccccc tgcgaaccgtcggattatgagaggaatcaggagctctgtcacgttgctgtggagaaacca cccaaggactcaggaggaggaagagtcaaggagagcaagagaaacagaaccgacccggct ttgcaggtcttctacattaaggccattgagccacaaaaaatatcgaccttagggaaaagt aatgtgattgttactggagcaaacttcacccaagcgtcaaatatcaccatgatcctgaga ggaaccagtacatgtgagaaggatgtgatccgggttagccatgtgctaaatgacacacac atgaaattctcgcttccatcgagccgcaaggaaatgaaagacgtttgcatccagttcgac ggtgggaactgctcgtccgctggggcgctctcatacattgccctgccgcactgttccctg atagtgcctgccaccacctggatcagtggtggacaaaatataaccatcatgggcaggaat tttgacgtcattgacaacctaatcatttcacatgagctgaagggaaacataaatgtaagc ataaacgtctctgaatactgcatggcaacttcctgcaggtttttagctcctaatttaaag agctccaaagggcgtacaaatgtggttgtgaagctaagggtacaagacacctacttggac tgtggaaccctgcagtacctcgaggaccccagatttacagggtaccgagtggagtcagag atcgatacagagttggaagtaaaaattcaaaaagaaaacgacaatttcaacatttccagg gatgacatcgatattactctcttccatggggaaaacaaacaatttaattgcagtttcgaa aatatcaccagaaaccaagatctcacaaccatcctttgcaagatcaagagcatcaagaat gcaaacaccatcgccacctcctctaagaaagtccgagtcaaactgggaaatctggagctc tatgtggaacaggaatccgttccttccacgtggtattttctgatcgcgcttccaatcttg ctggccattgtcattgttgtggctgtggtggtgaccaggcacaaatccaaggagctgagt cggaagcagagccaacagctggaactgctggagagtgaactccggaaagagatccgcgat ggctttgccgagctccagatggataaattggatgtggttgatagttttggaacggtaccc ttccttgactacaaacatttcgctctgagaactttcttccctgagtcaggtggcttcacg cacatcttcactgaggacatgcacaacagagacgccaatgacaagaacgagagcctcaca gccttggatgccctaatatgtaataaaagcttcctagttactgtcatccacacccttgag aagcagaagaacttctcagtaaaggacaggtgtctctttgcgtccttcctaaccatcgct ctgcaaaccaagctggtctacttgaccagcatcctggaggtgctgaccagagacctgatg gagcagtgcagtaatatgcagcccaagctcatgctgaggcgcacggagtctgtggtggag aaactccttacaaactggatgtccgtctgtctctctggtttccttcgggagactgttggg gaaccattctatttgctggtgacgactctgaaccagaagataaacaagggtcctgtggat gtgatcacctgcaaagcgctgtacacccttaacgaagactggctgctgtggcaggttcct gaattcaacactgtggcattaaatgtcgtctttgaaaaaatcccagaaaatgagagtgca gatgtctgccggaatatttcagtcaatgttcttgactgtgacaccataggccaagccaaa gaaaagattttccaagccttcctaagcaaaaacggttctccatacggactccagctcaat gagattggccttgaacttcaggtgggaacacgacagaaagaactcctggacattgacagc tcctctgtgattcttgaagatgggataaccaagctgaacaccattggccactatgagata tcaaatggatccactataaaagtctttaagaagatagcaaattttacttcagatgtggaa tactcagatgaccactgccacttgattttgccagattcagaggcattccaagtagttcaa ggaaaaagacatcgagggaaacacaagttcaaagtaaaagaaatgtatctgacaaagctg ctgtcgaccaaggtggcaattcactctgtgcttgagaaactcttcagaagcatttggagt ttgcctaatagcagggccccatttgctataaaatacttctttgactttctggatgcccaa gctgaaaacaaaaaaatcacagaccctgatgtcgtacatatctggaaaacaaacagcctc cctcttcgattctgggtaaacatcctgaagaaccctcagtttgtctttgacattaagaag actccacacatagacagctgtttgtcagtgattgcccaagcattcatggatgccttttct ctcacagaacagcaactggggaaggaagcaccaaccaataaacttctctatgccaaggat ataccaacctacaaggaggaagtgaagtcttactacaaagcaatcagggatttgcctcca ttgtcatctttagaaatggaagaattcttaactcaggaatctaagaaacatgaaaatgaa tttaatgaagaagtggccttgacagaaatctacaaatacatcgtaaagtattttgatgag attctaaataaactagaaagagaacgagggctggaagaagctcagaaacaactcttgcat gtaaaagtcttatttgatgaaaagaagaaatgcaagtggatgtaa

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