Rattus norvegicus (rat): 362902
Help
Entry
362902 CDS
T01003
Symbol
Dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rno03009
]
362902 (Dcaf13)
04121 Ubiquitin system [BR:
rno04121
]
362902 (Dcaf13)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
90S particles
Other 90S particles
362902 (Dcaf13)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
362902 (Dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
ANAPC4_WD40
MIOS_WD40
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
362902
NCBI-ProteinID:
NP_001167029
RGD:
1308458
Ensembl:
ENSRNOG00000004301
UniProt:
B0BN91
LinkDB
All DBs
Position
7:72045828..72081039
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMDGPGCGEEEEPLYTVLGKTVYTGIDHHWKDPAFATCGQQVDI
WDEQRTSPVCSMNWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHLDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKSRSREVYHTRRMQHVICVKWTSDSKYILCGSDEMNIRLWKANASEKL
GVLTSRERAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEARRRKEMN
RRKHSKPGSVPVVSERKKHVVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaaatgctgagccggaaccctgacaactatgtccgcgaaaccaagctggac
atacaaagagttccaagaaactacgatcctactttacatccttttgaagtcccaagagaa
tatgtaagagctttaaatgctaccaagttggaacgggtgttcgcaaaaccattccttgct
tccctggatggtcaccgtgatggagtcaattgcctggccaagcatccaaagagcctggct
actgttctttctggggcgtgtgatggagaggttaaaatttggaacctgactaaacgaaaa
tgtatccgaacgatacaagcacatgaaggttttgtccgaggaatatgcactcgcttttgt
ggaacttctttttttactgtcggagatgacaaaactgtgaagcagtggaaaatggatgga
ccaggctgcggagaggaggaggaaccgttgtacacggtgttaggaaagacagtatatact
ggcattgatcatcactggaaagacccggcctttgccacgtgtggacagcaagtagacatt
tgggatgaacaaagaaccagccctgtgtgctcaatgaactggggatttgacagtataagt
agtgttaaatttaaccctattgagacatatctcttgggaagttgtgcttctgataggaat
atagtactgtatgatatgcggcaagctactcctttgaaaaaggttatcctagatatgaga
acaaatacaatctgttggaaccctatggaagctttcaattttactgcagccaatgaagac
tataacttgtatacttttgatatgcgtgcactggacactcctgttatggtccacctggat
catgtatctgcagtgcttgatgtagactactctccgactgggaaggaatttgtgtctgct
agttttgataagtctattagaatcttccctgtggacaaaagccgaagcagggaagtgtat
catacgaggcgcatgcagcatgttatttgtgtgaaatggacttctgacagcaagtacatt
ctgtgtgggtctgatgagatgaacatccggctgtggaaagccaatgcctctgaaaaattg
ggtgtgcttacatcacgagaaagagcagcaaatgattataaccagaagttaaaggaaaaa
tttcagtaccatccacatgtgaaacggattgctcgccaccgacatctgccaaaatctatc
tacagccagattcaggagcagcgtgttatgaaggaggctcgtcgccgcaaggaaatgaat
cgtcgtaaacatagcaagcctggatctgtgccagttgtgtcagagaggaagaaacacgta
gtggcggttgtgaaataa
DBGET
integrated database retrieval system
