KEGG   Rattus norvegicus (rat): 363064
Entry
363064            CDS       T01003                                 
Symbol
Skic8
Name
(RefSeq) superkiller complex protein 8
  KO
K12602  WD repeat-containing protein 61
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    363064 (Skic8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    363064 (Skic8)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     363064 (Skic8)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP eIF2A Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_NWD2_C Tricorn_2nd WD40_RFWD3 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_SPT8 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_DCAF12 PROPPIN Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_LRRK2 VPS8_N Beta-prop_RIG_1st WDR54 Beta-prop_IFT122_2nd WD40_like GSDH Nucleoporin_N DUF2415
Other DBs
NCBI-GeneID: 363064
NCBI-ProteinID: NP_001020914
RGD: 1308228
Ensembl: ENSRNOG00000012803
UniProt: Q4V7A0 A6J4M6
LinkDB
Position
8:complement(63999669..64016959)
AA seq 305 aa
MTNQYSILFKQEQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSL
EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQH
LATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF
CPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHV
YDCPI
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaccaaccagtacagtattctcttcaagcaagagcaagcccacgatgatgccatatgg
tcggttgcctgggagacaaacaaaaaggaaaacattgaaacagtggtcacaggatccctg
gatgatctggtgaaggtctggaaatggcgtgatgagaggctggagctgcagtggagcctg
gagggacatcagcttggtgtggtgtctgtcgacatcagccacacccttcccattgctgcc
tccagttctctagatgctcatattcgactctgggacttggaaaatggcaaacagatgaag
tctatagatgcaggaccggtggatgcctggactttggcattctctccggactcccagcat
ctggcaacaggaactcacatggggaaagtgaacatttttggtgtggaaagtggaaaaaaa
gaatactctttggacactagaggaaaattcatccttagcattgcatatagtcctgatgga
aaatacctggccagcggagccatagacgggatcatcaatatttttgatattgcaactgga
aagcttctgcacacgctggaaggccatgcgatgcccattcgatccttgaccttttcccct
gactcccagctcctcgtcacggcttcagatgatggctacatcaagatctatgatgtgcaa
catgccaatttggctggcacactgagtggccatgcatcctgggtattgaatgttgcgttc
tgtccagatgacactcactttgtttccagttcatccgacaaaagtgtaaaggtctgggat
gttggaacaaggacctgtattcacaccttctttgaccaccaggatcaggtttggggagta
aaatataatggaaatggatcaaaaattgtgtctgttggagatgaccaggagatccatgtc
tatgactgcccaatttaa

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