Rattus norvegicus (rat): 363067
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Entry
363067 CDS
T01003
Symbol
Sin3a
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04350
TGF-beta signaling pathway
rno04919
Thyroid hormone signaling pathway
rno05016
Huntington disease
rno05169
Epstein-Barr virus infection
rno05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
363067 (Sin3a)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
363067 (Sin3a)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
363067 (Sin3a)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
363067 (Sin3a)
09164 Neurodegenerative disease
05016 Huntington disease
363067 (Sin3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
363067 (Sin3a)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
363067 (Sin3a)
REST complex
363067 (Sin3a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
363067 (Sin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
363067
NCBI-ProteinID:
NP_001382569
RGD:
1311598
Ensembl:
ENSRNOG00000032254
LinkDB
All DBs
Position
8:66377471..66432150
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDDQESPVYAAQQRRIPGSTEAFSHQHRVLAPAPPVYEAVSETMQSATGIQYSVAP
NYQVSAVPQSSGSHGPAIAAVHSSHHHPAAVQPHGGQVVQSHAHPAPSVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPTPAQ
PAPQPTPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHSGTGATPPVKKKPKLISLKESSMADASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLESFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAPKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEVCVQ
VTDLYLAENNNGATGGQLSSQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMSSDTTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKTMENVESLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSI
KKYRVKYGTVFKAP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgtttggatgaccaggaatcaccagtgtatgcagcccagcagcgaaggatt
cctggaagcacagaggctttttctcaccagcaccgggttcttgccccggcccctcctgtg
tatgaagcagtgtctgagaccatgcagtcagctacaggcattcagtactcagtggcaccc
aactaccaggtttcagctgtgccacaaagttctggcagtcatgggcctgccatagcagcg
gttcatagcagtcatcatcacccagcagctgtccagcctcacggaggtcaggtggtccag
agccatgcccatccagccccgtcagttgcaccagtgcagggacagcagcaatttcagagg
ctgaaggtggaggacgccctgtcctaccttgaccaggtgaagctgcagttcgggagtcag
cctcaggtctacaatgatttcctcgacatcatgaaggaatttaaatctcagagcattgat
actccaggagtgattagccgcgtgtcccagctatttaaaggccaccctgacctgatcatg
ggcttcaatacctttttgcctcctggctataaaattgaggtgcagacaaatgacatggtg
aatgtgacaactcctggccaggttcatcagattcccacccatggcatccagccccagccc
cagccaccacctcagcatccttcccagccttcagcccagtcagctcccactcctgcccag
ccagctcctcagcccacacctgccaaagtcagcaagccttcccaactacaagcacatacg
ccagccagtcagcagactcccccactcccaccatatgcatccccacgttctccacccgtc
cagcctcacacaccagtgacaatctccttgggaacggctccatctttgcagaacaatcaa
cctgtggagtttaatcatgccatcaactatgttaataagatcaaaaacagattccagggc
caaccagacatctacaaagcattcctggagattttgcacacataccagaaagaacagcgg
aatgccaaggaagctggaggaaactatactccagctttgacggaacaagaggtgtatgcc
caggtggctcgtctcttcaaaaaccaggaagatctgttgtctgagtttggacagttcctg
ccagatgccaacagctcggtgcttttaagcaaaacaactgctgagaaggtggattctgtg
agaaatgaccatggaggcacagtgaagaagccccaactaaataacaagccacagaggccc
agtcagaacggctgccagatccgcaggcactctgggacaggagccacacctccggtgaag
aaaaaacccaaactgattagtctaaaggagtcttcgatggcagatgccagcaagcatggt
gttgggactgaatcgttattttttgataaggttcgaaaggctctccggagtgcagaggcc
tatgaaaacttccttcgatgccttgttatctttaaccaggaggtgatctctcgggcggag
cttgtacaactagtctctccttttctggggaaattccctgaattgtttaattggtttaaa
aactttttgggctataaggagtctgtgcatctggaaagctttccaaaggagcgcgccaca
gagggcattgctatggagatagactacgcctcttgtaaacggctgggctccagctaccgg
gcgctgccgaaaagttaccagcaacccaagtgtacagggcggactcctctgtgtaaggag
gttttaaatgatacctgggtttccttcccctcttggtctgaagactccactttcgttagt
tctaagaagactcagtatgaagaacatatttaccgttgtgaagatgaacgatttgagctt
gatgtggttctcgagaccaatcttgcaacaatccgggttttagaagcaatacagaaaaaa
ctttcccgcttgtctgctgaggaacaagccaaatttcgcttagataatactcttggaggc
acgtctgaagtcatccatcgaaaagcactccagaggatatatgctgacaaagcagcggat
atcattgatggcctgaggaagaatccctccattgctgttcccattgtccttaaaaggttg
aagatgaaggaggaagagtggcgggaagctcagagaggcttcaacaaggtctggcgagag
cagaatgagaagtactacttaaagtctttggatcaccagggcatcaacttcaaacagaat
gacactaaggtcttgaggtctaagagcttactcaatgagatcgagagcatctatgatgag
aggcaagagcaggctacagaagagaatgctggtgtacctgttggcccacacctctctctt
gcctatgaagacaagcagatattagaagatgctgctgctctgattatccatcatgtgaag
aggcaaacaggaattcagaaagaggacaaatacaaaatcaagcaaatcatgcatcatttc
attcctgatctgctgtttgctcagagaggggatctctcagatgtggaagaagaagaggag
gaagaaatggatgtggatgaagctacaggggcacctaagaagcacaatggtgttgggggc
agccccccaaagtccaagttgttatttagtaacacagcagctcagaagttaagagggatg
gatgaagtgtacaacctcttctatgtcaataacaattggtatatctttatgcggctgcat
caaattctctgcttaaggctgctacggatttgttcccaagctgagcggcaaattgaagaa
gaaaacagagagagagaatgggaacgggaggtgctaggcataaagagagataagagtgat
agtcctgccatacagctgcgtctcaaagaacctatggatgtggatgtagaagattattac
ccagctttcctggacatggtgcggagcctgcttgatggcaacatagactcatcacaatat
gaagattcactgagagagatgttcaccatccatgcctacattgcctttactatggacaaa
ttaatccagagcatcgtcagacagctgcagcatattgtcagcgacgaggtctgtgtgcag
gttactgacctttacttggcggaaaacaacaacggagccactggaggccagctgagcagt
cagacatcgaggagccttctggagtcgacataccagcggaaagcagagcagctcatgtcg
gatgagaattgctttaagctaatgttcattcaaagtcaaggtcaagttcagctgaccatt
gagctcctggacacagaagaggagaactcagatgaccctgtagaagcagagcgttggtca
gactatgtggaacgatatatgagttctgatactacttctccagaacttcgagaacatctg
gcacagaaaccagtatttctcccaaggaatttgcggcgtattcggaagtgtcagcgtggt
cgagagcaacaggaaaaagaagggaaagaaggaaacagcaagaagaccatggagaatgta
gagagcctggataagctggagtgtaggttcaagctgaactcctataagatggtgtatgtg
atcaagtcagaggactacatgtaccggaggacagctctgctcagagctcaccagtcccac
gagcgtgtaagcaagcgtctgcatcagcggttccaggcctgggtagataaatggaccaag
gagcatgtgcctcgtgaaatggcagcagagaccagcaagtggctcatgggtgaggggcta
gagggcctggtaccctgcaccaccacctgtgatacagagactctgcactttgtgagcatt
aagaagtatcgtgtcaaatacggcacagtattcaaagccccttaa
DBGET
integrated database retrieval system