Rattus norvegicus (rat): 363235
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Entry
363235 CDS
T01003
Symbol
Als2
Name
(RefSeq) alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05014
Amyotrophic lateral sclerosis
rno05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
363235 (Als2)
05022 Pathways of neurodegeneration - multiple diseases
363235 (Als2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
363235 (Als2)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
363235 (Als2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
MORN
VPS9
RCC1_2
RhoGEF
PH
Motif
Other DBs
NCBI-GeneID:
363235
NCBI-ProteinID:
NP_001013431
RGD:
1310372
Ensembl:
ENSRNOG00000023280
UniProt:
P0C5Y8
LinkDB
All DBs
Position
9:complement(68107310..68180192)
Genome browser
AA seq
1651 aa
AA seq
DB search
MDSKKKSSAEAEGSKERGLVHVWQAGSFSLTPERLPGWGGKTVLQAALGVKHGVLLTEDG
EVYSFGTLPWKSEAAEICPSSPLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAA
GQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPPQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQAEKHASTVTSPHPETLDGQGEVFENTVAEAELN
MGSDQTTSGSAISAQQNIVGMAEVSSARTAPSYPDTQTVTAYLQKLSEHSVKENHEREEK
LPQVQPLVEEAVPDLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYS
TAPCEPGAPSGTASTGPESLKDLREEQVKQESLQGKKSSSLMDIREEESEGGSRRLSLPG
LLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLP
RLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVPRLSKV
SSESGVWSVAAGHGYSLFLVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTTTPVLLSCSK
LGYISRVTAGKDSYLALVDKNIMGYIASLHELATTERRFYSKLSEIKSQILRPLLSLEHL
GTVTTVQLLQEVASRFSKLCYLIGQHGASLSSYLQGMKEARNLVIMKHSSLFLDSYTEYC
TSVSNFLVMGGSQLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNALFFLPIRRLHN
YAKVLLKLATCFEVTSPEYQKLQDSSSCYESLALHLGKKRKEAEYTLSFWKTFPGKMTDS
LRKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWAEPLSE
ETGGVNGLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGTSDFPLYGGSSTVQRQ
EPPISRSAKYTFYKDTRLKDATYDGRWLSGKPHGRGVLKWPDGKVYSGTFRNGLEDGYGE
YRIPNKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSS
SPSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDACQGNGVVVTQFGLYYEGNFHLNK
MMGNGVLLSEDDTIYEGEFSDDWTLCGKGTLTMPNGDYIEGYFSGEWGSGIKITGTYFKP
SLYESDKDRPKAFRKLGNLAVAADEKWRAVFDECWRQLGCESPGQGEVWKAWDNIAVALT
TNRRQHKDSPEILSRSQTQTLESLEYIPQHVGAFSVEKYDDIKKYLIKACDTPLHPLGRL
VETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRIFQLVRFLFPELPEEGSTVPLSAPL
PTGRRSFCTGKSDSRSESPEPGYVVTSSGLLLPVLLPRLYPPLFMLYALDNDREEDIYWE
CVLRLNKQPDIALLGFLGVQRKFWPATLSILGESKKVLPSTKDACFASAVECLQQISTTF
TPSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSEVHLIED
LMDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagaagaaaagctcagcagaggcagaaggatccaaagaaagaggcctagtc
catgtctggcaggcaggatccttttctctaacaccagagaggttgccaggctggggagga
aaaacagttcttcaggcggcccttggcgtgaagcatggagttcttctgactgaagatggt
gaggtctacagctttgggacccttccctggaaaagtgaagcagcagaaatttgtccaagc
agcccccttctagaaagtgccctggttgggcatcatgttgttactgtggcaacagggagc
ttccacagtggagcggtgacagaaagtggagtggtgtacatgtggggggagaacgctgcc
gggcagtgtgcagtagcgaaccagcagtatgtgtcggaaccaagtcctgtcagcatttct
gactcggagaccagccccttgctagcagttaggattctgcagttggcatgtggcgaggaa
cacacactggcattgtcaatcagcagagagatctgggcatggggcaccggctgtcagctg
ggtctcatcaccaccaccttcccagtgacaaagccacaaaaggtggaacaccttgctgga
cgagtggtgctccaggtggcctgtggtgcgttccacagccttgcacttgtgcagtgcctc
cctccccaggatctgaagccagtcccagagagatgcaatcagtgcagccagctgctcatc
accatgacagacaaagaggaccacgtgataatatcagacagccattgctgccctttaggt
gtgacactgtctgaatctcaagcagaaaagcacgccagcactgtgaccagccctcacccg
gagacgctggatgggcaaggagaggtgtttgagaacacagtagcagaagctgaactgaat
atgggaagcgatcagaccacaagtggcagtgccatttccgcccagcagaacatcgtggga
atggctgaagtgtcttctgccagaacagctccctcatacccagacacccagacggtaact
gcatacctgcagaagctatcagagcattcagtgaaggagaaccatgagcgtgaggaaaag
ctaccccaggtccagcctcttgtagaagaagcagttcctgatcttcacagtccaccaacc
acaagcacctcagccctcaacagcttggtggtctcctgtgcatctgctgttggtgtgaga
gtggccgccacctatgaagctggggccttgtctctcaagaaagttatgaacttttatagc
actgccccctgcgagccaggagctccgtcaggcactgcctccacaggcccagaaagtctg
aaagatctcagagaagagcaggtgaaacaggaatcactacaagggaagaaaagctcaagc
ctcatggatatcagagaggaggagtcggagggagggagtcgaagactctccctcccagga
ttgttgtcgcaagtttcccccaggctcttaaggaaggccgccagggtgaaaacacggaca
gtggttctgactcccacgtacagtggagaagcagatgccctcctgccttcgctgagaaca
gaggtgtggacctgggggaaaggcaaggaagggcagctggggcacggcgatgtcctgccc
aggcttcagccgttgtgtgtcaagtgtctggatggtaaagaggtcatccacttggaggca
ggtggctcccactctctcgcactgactgcgaaatctcaggtttactcatggggcagtaat
accttcggtcagctggggcattctgagtttccaacaacggttcctcgactctcgaaggtt
agcagtgaaagtggagtctggagtgtagctgcaggccacggttattccctgtttttagtg
gacactgaagacttccagcctgggttgtattacagtggccgccaggaccgtgcagaaggt
gacaccctgccagagaatcccagtggtacaacgactccggtacttctctcctgtagtaag
cttggatatatcagcagagtgacagcaggaaaagatagctacctagccttggtggataag
aacatcatgggatacatcgccagcctccatgagttggctaccacagaaagacggttttac
tcgaaactaagtgaaatcaagtcacagatacttaggcctcttctcagtctggaacatttg
ggcactgtgaccactgtccagctgttgcaggaagtcgccagccggttcagcaagttgtgt
tacctcattgggcagcatggagcctcactgagcagctacctgcaaggcatgaaggaagcc
aggaacctggtcatcatgaagcactcgagtcttttcttggacagttacacagagtattgt
acatcagtttcaaattttctggttatgggaggatcccagcttcttgctaagcctgcaatt
gatttcctaaataaaaaccaagaactcttgcaagatttgtcagaagtgaatgatgagaac
actcagttgatggaaatactgaatgcgctgtttttcttgccaatcagacgacttcataat
tatgcaaaagttttgctaaagctcgccacttgctttgaagtgacatcaccagagtatcaa
aagctgcaggattccagttcttgttatgagtctcttgctctccatcttggcaagaagagg
aaggaagcagagtacacgctgagcttctggaagaccttccctggaaaaatgacggattcc
ttgaggaagccagagcgccggctgctgtgtgagagcagtaaccgagccctctccctgcag
catgctggcaggttttctgtgaattggttcattctcttcaatgatgccctggtccatgct
cagttctccacacaccacgtgttccctttggccacactctgggcagagccactttctgaa
gaaactggtggcgtgaatggcttaaagataaccacacctgaagaacagttcacgctcatt
tcttcaacaccccaggaaaagaccaagtggcttcgggctatcagccaagccgtggaccag
gctttgagggggacgtctgacttcccactttacggaggcagcagcactgttcagaggcag
gaaccacccatctcaagaagtgccaaatacactttctacaaggatactcgcctaaaggac
gccacttacgatgggcgctggctttcagggaagccgcacggaaggggtgttttgaagtgg
cctgatgggaaggtgtattctggcacgttcaggaatggcttggaagacggatatggtgaa
tacagaatcccaaacaaggccctgaacaaagaagaccattacgtgggccattggaaggag
gggaaaatgtgtgggcaaggagtgtacagctatgcctctggtgaagtgtttgaaggctgc
tttcaagataacatgcgccacgggcacggtctcctccgcagtggaaaactgacttcttcc
tctcccagcatgttcattggccagtgggtaatggacaagaaagcagggtatggcgtcttc
gatgatatcaccaggggagaaaagtacatgggaatgtggcaggacgatgcatgccaaggg
aatggggtggtggtcacccagtttgggttatactacgaaggcaacttccaccttaataaa
atgatgggaaatggggttttgctttcggaagatgatactatatatgaaggagaattttct
gatgactggacactttgtggaaagggaacactgactatgccaaatggagattatattgaa
ggttattttagtggagaatggggatctgggataaaaatcactgggacctacttcaaacct
agcctatatgagagtgataaggacaggcccaaagccttcaggaagctgggaaacctggcc
gtggccgccgatgagaaatggagagcagtgtttgacgaatgctggcgccagctgggctgt
gagagcccaggccaaggggaggtttggaaagcgtgggataatattgctgtggccttgacc
accaaccgtcgccagcataaagacagtccagaaatactaagccgttcacagactcagacc
ctggagagtttggagtacattccccagcacgttggcgccttctctgtggagaaatatgat
gatatcaagaagtatttaataaaggcctgtgacactcctctgcacccactgggcaggctt
gtggagaccctggttgcagtgtatagaatgacttatgtgggcgtaggggccaaccgtcgg
ttactgcaggaagctgtgaaggagattaagtcttatctcaagaggattttccaacttgtg
aggttcttgtttcctgagcttcctgaagagggcagcacagttcctctctctgctcctctg
cccactggaagaagatccttctgcactgggaaatcagattccagatccgagtcaccagag
ccaggttatgtagtaacaagttctggcttactgcttccggtgctgctgcctcggctctac
ccgcctctcttcatgctctatgccctggacaatgaccgagaggaagacatttactgggaa
tgtgtgcttcgactaaacaagcagccagatattgctctcctgggctttcttggagtacag
aggaaattctggccagcaaccttgtcaatccttggagagagtaaaaaggtactgccatcc
acaaaggatgcttgttttgcatctgcagtagaatgtctgcagcagatcagcacaacattt
actccatcagacaaacttaaagtgatccagcagaccttcgaagaaatctctcagagtgtg
ctggcgtcgctgcaggaggacttcctttggtccatggatgacttgttccctgtcttctta
tacgtggtgctgcgggccaggattcggaatttaggctctgaagttcatctcattgaggat
ctgatggacccctatctccagcatggggagcaaggcataatgttcaccaccttgaaggcc
tgttactaccagattcagcgtgagaagcttaactag
DBGET
integrated database retrieval system