Rattus norvegicus (rat): 363247
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Entry
363247 CDS
T01003
Symbol
Xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
363247 (Xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rno03400
]
363247 (Xrcc5)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
363247 (Xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
DUF6005
TraI_2
Motif
Other DBs
NCBI-GeneID:
363247
NCBI-ProteinID:
NP_803154
RGD:
3976
Ensembl:
ENSRNOG00000016105
UniProt:
G3V817
Q6P7P8
A6KFI3
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All DBs
Position
9:81404507..81493293
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AA seq
732 aa
AA seq
DB search
MAWSGNKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYG
TESTDNALAGKDQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQR
ETIGKKFGKKHIEVFTDLSSPFSQDQLDIIICNLKKSSISLQFFLPFPIDKNGEPGETED
HDSSFDHCAPSFPQKGLTEQQKEGIHMVTRVMLSLEGKDGLDEIYSFSESLQQLCIFKKI
ERRSLPWPCQLTIGPNLSIRIVAYKSIVQEKFKKSWVVVDARTLKKEDIQKETVYCLNDD
DETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVHRRFFMGHQ
VLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDKRANPQVGVAFPFIKDAYECLV
YVQLPFMEDLRQYMFSSLKNNKKCTPTEAQLSAIDDLIDSMSLVKKNEEEDIIEDLFPTS
KIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCEIPLSKVKTLFPLT
EVVKKKDQVTAQDVFQDNIEEGPAAKKYKTEKEEGHISISSLAEGNVTKVGSVNPVENFR
VLVRQKIASFEEASLQLMSHIEQFLDTNETLYFMKSMDCIKALREEAIQFSEEQRFNSFL
EGLREKVEIKQLNHFWEIVVQDGITLITKDESPGSSVTAEEATKFLTPKDKAKEDTTGLE
EGGDVDDLLDMI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtccggtaataaggcagctgttgtgctgtgtatggatgtgggggttgccatg
ggtaactcctttcctggtgaagaatccccacttgaacaggccaagaaagtgatgactatg
tttgtccaacgacaggtgttttcggagagcaaggatgagatcgccttagtcctctatggt
acagagagcactgataacgcccttgctggcaaggaccagtatcagaacatcacagtgcac
aggcacctgatgctaccagattttgatttgctggaagacatcggaaacaaaatccaacca
agttctcaacaagccgacttcctggacgccctgattgtgtgcatggatttgattcagcgt
gaaaccataggaaagaagtttgggaagaagcatattgaagtgttcactgacctcagcagc
ccattcagccaagaccaactggacattataatttgtaacctgaagaagtccagcatctcc
ctgcagttctttctgccttttccaatcgacaagaatggtgagcctggggagacagaagac
cacgactccagcttcgaccactgtgcaccctccttccctcaaaaaggacttactgagcag
caaaaggaaggcatccacatggtgacgagggtgatgctgtctttagaaggcaaagatggt
ctggatgaaatttattccttcagcgagagtcttcagcaactgtgcatctttaagaagatt
gagaggcggtccttgccctggccctgccaactgaccatcggccccaacttgtctataagg
atcgtagcctataaatcgattgtacaggagaaatttaaaaagagttgggtagttgtggac
gcaagaactctaaagaaggaagatatacaaaaagagactgtttattgcctaaatgacgat
gatgaaactgaagtttccaaagaggacactattcaagggttccgctatggaagcgacatc
attcctttttctaaagtggatgaggaacaaatgaaatataaatcggaggggaagtgcttc
tctgttctggggttctgtaaatcttctcaggttcatagaagattcttcatgggacatcaa
gttctgaaggtcttcgcagcgaaggatgatgaggcagcagctgttgcactttcttcccta
gttcacgctttggatgagttaaacatggtcgctatcgtccgctacgcctatgacaaaaga
gctaatcctcaagttggtgtagccttccctttcattaaggatgcctatgagtgtttagtt
tatgtgcagctgcctttcatggaagacttgcggcaatacatgttttcctcactgaaaaac
aataagaagtgcacccccacagaggcacagctgagtgcgatcgatgatctgattgattcc
atgagcttggtaaagaaaaacgaggaagaagacatcatcgaagacttgtttccaacctcc
aaaattccaaatcctgaatttcagcggttgtaccagtgtctgctgcacagagccttacat
ctccaggagcggctgcccccaattcagcagcacattttgaatatgctggatccccccact
gagatgaaagcaaaatgtgagattccactctctaaagtaaagacccttttccctctgacg
gaagtcgttaagaaaaaggaccaagtgactgctcaggacgttttccaagacaatattgaa
gaggggcccgctgctaaaaaatacaagactgagaaagaagaaggtcacatcagcatctcc
agcctggcagaagggaatgtcaccaaggttggaagtgtgaatcctgttgaaaacttccgt
gtcctagtaagacagaagattgccagctttgaggaagcgagtctccagctaatgagtcac
attgaacagtttttggataccaatgaaacactgtattttatgaaaagtatggactgcatc
aaagctctccgggaggaagccattcagttttcagaagagcagcgtttcaacagtttcctg
gaaggccttcgagagaaagtggaaattaaacaattaaatcatttctgggaaattgtcgtg
caggatggaattactctgatcaccaaagacgaaagcccaggaagctctgtcacagctgag
gaggccacgaagttcctgacccccaaagacaaagcaaaagaagacacaacaggacttgaa
gaaggtggtgatgtggatgatttactggacatgatatag
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