Rattus norvegicus (rat): 363457
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Entry
363457 CDS
T01003
Symbol
Col4a5
Name
(RefSeq) collagen alpha-5(IV) chain precursor
KO
K06237
collagen type IV alpha
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04151
PI3K-Akt signaling pathway
rno04382
Cornified envelope formation
rno04510
Focal adhesion
rno04512
ECM-receptor interaction
rno04820
Cytoskeleton in muscle cells
rno04926
Relaxin signaling pathway
rno04933
AGE-RAGE signaling pathway in diabetic complications
rno04974
Protein digestion and absorption
rno05146
Amoebiasis
rno05165
Human papillomavirus infection
rno05200
Pathways in cancer
rno05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
363457 (Col4a5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
363457 (Col4a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
363457 (Col4a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
363457 (Col4a5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
363457 (Col4a5)
09154 Digestive system
04974 Protein digestion and absorption
363457 (Col4a5)
09158 Development and regeneration
04382 Cornified envelope formation
363457 (Col4a5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
363457 (Col4a5)
09162 Cancer: specific types
05222 Small cell lung cancer
363457 (Col4a5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
363457 (Col4a5)
09174 Infectious disease: parasitic
05146 Amoebiasis
363457 (Col4a5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
363457 (Col4a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
363457 (Col4a5)
00536 Glycosaminoglycan binding proteins [BR:
rno00536
]
363457 (Col4a5)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
363457 (Col4a5)
Glycosaminoglycan binding proteins [BR:
rno00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
363457 (Col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
363457
NCBI-ProteinID:
NP_001413925
RGD:
1565499
Ensembl:
ENSRNOG00000018951
UniProt:
A0A8I5ZZ86
LinkDB
All DBs
Position
X:109907251..110111214
Genome browser
AA seq
1691 aa
AA seq
DB search
MQVPGVCLAAGWFLLALCLWGQPGEAAACHGCSSGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNQGYPGPPG
IQGPPGPKGVSGPSGPPGPPGLMGPPGPPGPPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDLDFQKGDQGVPGDRGPPGPPGIPGPPGPPGGVKGEKGEPGEPGKRGKP
GKDGETGQPGIPGLPGDPGYPGEPGRHGEKGQKGDTGPPGPPGFVIPTPGTGVTIGAKGN
IGQPGLPGEKGERGFPGIQGPPGFPGPPGTAVMGPPGPPGYPGERGQKGDEGPPGICIPG
SPGLDGQPGAPGFPGPPGPPGPQLPPSDEICKAGPPGPPGSPGDQGLQGEQGVKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGIPGEKGEKGQAGTTGPKGLPGIPGPPGAPGF
PGSKGDPGDVLTLPGMKGEKGELGSPGAPGLPGLPGSPGKDGLPGLPGPKGEPGGITFKG
ERGPPGNPGLPGLPGNMGPTGPVGFGPPGPVGEKGIQGVAGNPGQPGLPGPKGDPGQTIS
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGPPGPPGPKGFPGI
PGPPGPPGAPGRMGPEGPPGLPGFPGPKGEPGFGLPGPPGPPGFPGFKGTPGPKGDRGLP
GPPGPPGHTGLDGLPGPKGDAGPNGQPGPIGPPGLPGIGLQGPPGPPGTPGPIGQPGLHG
IPGEKGDPGPPGLDVPGLPGERGSPGLPGAPGLIGPPGSPGIPGRAGVPGFPGVKGEMGM
MGPPGPPGPLGTPGRSGAPGLKGDDGMQGQPGLPGPVGEKGGKGEPGLPGPPGPMRPDFL
GSKGEKGDPGLPGIPGLSGPKGYQGLPGDPGQPGLSGQPGSPGLPGPKGTPGLPGPPGLT
GPPGPKGNIGDMGFPGPQGVDGPPGPPGGPGQPGSPGLPGQKGSKGEPGVSGIGLPGLPG
PKGEPGLPGYPGNPGIKGSMGEAGLPGLPGSPGAKGQPGLPGFPGTPGLPGPKGMNGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGAPGLPGNPGLPGSKGEPGFQGFPGMPGPPGPPGSPGPSLEGPKGNPGPQGPP
GRPGPPGFQGPPGTEGPRGPPGNGGIKGERGNPGPPGQPGLPGLKGDQGPPGLPGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPIGVPGSTGPDGEPGLTGPPGPPGLPGPSGQSIVIKGD
PGPPGIPGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGS
RGLDGPPGPDGLQGPPGPPGTTSVAHGFLITRHSQTTDAPQCPQGTVHIYDGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMNMEPLKG
QSIQPFISRCAVCEAPAVVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDMSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgcctggagtgtgcctggccgccggctggttcttactggccctgtgtctgtgg
gggcagccgggagaggctgcggcctgccatgggtgttcttctggatcaaaatgtgactgc
agtggtataaaaggagaaaagggagaacggggctttccaggcttagaaggccatccaggt
ttaccaggatttccaggtccagaagggcctccaggacctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggtcctcctggacttcctggattt
ccagggacaccaggccttcctgggatgccaggccacgatggggctccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgcggatttccaggcagtccaggctttccc
ggtttacaaggacctccaggaccacctgggatcccaggtatgaagggggagccaggcagt
ataatcatgtcatctctgccagggccaaagggtaatcaaggatacccaggtcctcctgga
atacaaggtccacctggtcccaagggtgtatcagggccaagtggtcctccaggaccacca
ggtttaatgggccctcctggcccaccaggcccaccgggaccaaaggggaatatgggctta
aatttccagggacccaaaggcgaaaaaggtgaacaaggtcttcagggtccacctggtcca
cctgggcagatcagtgaacagaaaagaccaattgacctagattttcagaaaggcgatcag
ggagttcccggtgatagagggcctcctggacctccgggaatacctggtcctcccggtcct
cctggtggtgtgaaaggtgaaaagggtgagcccggagagccaggcaaaagaggtaaacca
ggcaaagatggagagactggtcaaccaggaatcccaggtttgcctggtgatcctggttac
cctggtgaaccaggaaggcatggtgaaaagggccaaaagggtgatactggcccacctgga
ccacctggatttgtaattcctacacctggaactggtgtgactattggagcaaaaggaaat
attgggcaacctggtttgcctggagaaaaaggagagcgaggatttcctggcatacaaggt
ccacctggctttcctggacctccagggacagctgtcatgggtccccctggtcctcctgga
tatcctggtgaaaggggccagaaaggtgatgaaggtccccctggaatttgtattcctgga
tctcctggacttgatggacagcctggagctcctggctttccaggacctcctggtcctcct
ggcccccagttacccccgagtgatgaaatctgtaaagcaggccctccagggcccccagga
tctccaggtgaccaaggactccaaggagagcaaggagtaaaaggtgacaaaggtgatact
tgcttcaactgtattggaactggcatttcagggcctccaggccaaccaggtttaccaggt
ctcccaggtcctccaggatctcttggaatccctggagagaagggcgagaaaggacaagct
gggacaactggtccaaaaggattgccaggcattcctggacctccaggtgctccaggcttt
ccagggtctaagggtgaccctggtgatgttctcactcttccgggaatgaaaggtgaaaaa
ggagaattgggttcccctggagctccagggcttcctggtctacctggtagtcctggaaag
gatggtttgccaggacttcctggccccaaaggagagcccggtggaatcacttttaagggt
gaaaggggtcctcctgggaacccaggtttaccaggtctcccaggaaatatgggacctaca
ggccctgttggttttgggcctccaggccccgtaggtgaaaaaggcatacaaggtgtggcg
ggaaatccaggccagccaggattaccaggtcctaaaggtgatccaggccagaccatcagc
cagccaggaaagcctggcttgccagggaatccaggcagagatggtgaagtgggtcttcca
ggtgatcctggacttccaggccaaccaggcctaccaggaatacctggtagcaaaggagaa
ccaggtatccctgggattgggcctccaggaccacctggtcccaaaggttttccaggaatt
cctggacctccaggacctcctggggcccctggaagaatgggcccagaagggcctcctggg
ttaccgggctttccaggacccaagggagagccaggatttgggttacctgggccacctggg
ccaccaggattcccaggtttcaaaggaacacctggtccaaaaggtgatcgtggtttacca
ggacctccaggtcctccaggacacactggcttggatgggctacctggaccaaaaggtgat
gctggaccaaatggacaacctggcccaatagggccaccagggctgccaggaattggtctt
cagggaccaccaggaccaccagggactccagggccaataggccaacctggcttacatgga
ataccaggagagaagggagatccaggacctcctgggcttgatgttccaggactccctgga
gagagaggtagtccagggctccctggagcccctggtcttataggacctccaggatcacct
ggtatccctggaagagcaggtgtccctggatttccaggtgtcaaaggcgaaatgggtatg
atgggacctccaggcccaccgggacctttgggtactcctggcaggagtggtgctcctggt
cttaaaggtgatgacggcatgcaaggtcagccaggtctccctggccctgtaggagaaaag
ggtggtaagggagaacctggccttccaggtcctcctggaccaatgcgtccagatttcctg
ggatcaaaaggagaaaagggtgatcctggcttaccaggtattcctggactttccggacca
aaaggctaccagggattacctggagacccagggcaacctgggctgagtggacagccggga
tcaccaggactaccaggtcccaaaggtactcctggtctccctggtccaccaggacttacc
ggacctcctggacctaaaggaaacattggcgacatgggttttcctggccctcaaggtgta
gatgggcctcctggacctcctggaggtcctggacaacctggctctcccgggttgcctggc
cagaaaggaagtaaaggagaacctggagtttcaggcattggtctccctggtcttcctggt
ccaaagggtgaacctggtctgcctggatatccaggaaacccaggtatcaaaggttctatg
ggcgaggctggtctgcctggcttaccaggaagccctggagcaaaaggtcaacccggcctg
cccggattcccaggaacaccagggcttcctggaccaaagggtatgaatggtcctcctggt
aaccctggccttccaggagaacctggtcctgtaggtggtggagggcgtcctggaccacca
ggacctcctggtgaaaaaggcaagccaggtcaagatggcattcctggaccagcaggacaa
aagggagaaccaggtcaaccaggctttggaatcccaggacctcctggactcccaggactt
tctggtcaaaagggtgatggaggagcccctggccttccaggaaatcctggccttccaggt
tcaaagggtgaaccaggctttcagggattccctggtatgccaggtcccccaggtccccct
ggttctcctggcccatctttggaaggtcccaaaggaaaccctgggcctcaaggccctcct
gggagaccaggtcctccaggttttcaaggtccacctggtacagaaggtcctcgtggcccc
cctggaaatggaggtattaaaggagagaggggaaatccaggtccacctgggcaaccaggc
ttacctggcttgaaaggagatcaaggaccaccaggccttccgggtaaccctggccgacca
ggtcttaatggaatgaaaggagatcctggtctccctggtgttccaggattcccaggaatg
aaaggacccattggagtaccaggctcaactggccctgatggggaaccaggtcttacgggg
cccccaggtcctcctgggttgcctggtccttcaggacagagtattgtaatcaaaggagat
cctggacctccaggaattcctggacaacctggattaaaaggtctaccaggacttccaggc
cctcaaggtctaccaggtccaattggccctccaggagatccaggacgcaatggactccca
ggctttgatggtgcaggagggcgcaaaggagacccaggcctgccggggcagccaggtagc
cgtggattggatggtcccccaggaccagatggattgcaaggacctccagggcccccggga
accacctctgttgcccatggattcctcatcacacgtcacagtcagacaacagatgcacca
caatgcccacagggaacagtccatatctatgatggcttttctctcttatatgtacaagga
aataaaagagcccatggtcaagacttggggacagctggcagctgccttcgtcgcttcagt
accatgcctttcatgttctgcaacattaacaacgtttgtaactttgcttcaagaaatgac
tattcttactggctttccaccccagagcccatgccaatgaacatggaacccctgaagggc
cagagcatccagccattcattagtcgatgtgcagtatgtgaggcaccagctgtggtgatt
gcagttcacagccagactattcagattcctcactgtcctcaggggtgggactctctgtgg
attggctattcattcatgatgcatacaagtgcaggagcagaaggctctggccaagcccta
gcctctcctggctcctgtttggaagaatttcgttcagctcccttcatcgaatgtcatgga
cgagggacatgcaattactatgccaattcttacagcttttggctggccactgttgatatg
tcagacatgttcagtaaacctcagtcagagacactgaaagcaggcgacttgaggacacgt
attagccgatgtcaagtatgcatgaaaaggacataa
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