Rattus norvegicus (rat): 364624
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Entry
364624 CDS
T01003
Symbol
Lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
364624 (Lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
364624 (Lsm1)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
364624 (Lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
364624 (Lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
364624
NCBI-ProteinID:
NP_001102346
RGD:
1304967
Ensembl:
ENSRNOG00000015375
UniProt:
D3ZWB1
A6IW03
LinkDB
All DBs
Position
16:complement(72980075..72991581)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGRKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQSRLEAEKLKVQALKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcccggcaccgccagcctcatcgaggacatcgacaaaaagcacttggtc
ctacttcgagatggaaggacacttataggttttttaagaagcattgatcaatttgctaac
ctagtgctccatcagactgtggagcgaattcacgtgggcagaaagtacggtgatattcct
cgagggattttcgtggtcagaggagaaaatgtggtcctactaggagaaatagacttggaa
aaggaaagtgacacgccacttcagcaagtctccattgaagagatcctggaggaacagagg
gtagagcagcagagcaggctggaggcagagaagctgaaggtccaggcccttaaagaccgg
ggtctctccattcctcgtgcagacactctggatgagtactga
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integrated database retrieval system
