Rattus norvegicus (rat): 364630
Help
Entry
364630 CDS
T01003
Symbol
Thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1 precursor
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
364630 (Thsd1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
364630 (Thsd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D2
THSD1_N
THSD1_D3
TSP_1
TSP1_spondin
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
364630
NCBI-ProteinID:
NP_001102348
RGD:
1306998
Ensembl:
ENSRNOG00000012108
UniProt:
D3ZW62
A6IW78
LinkDB
All DBs
Position
16:complement(76473026..76507404)
Genome browser
AA seq
850 aa
AA seq
DB search
MKPMLKDFSNLLLVVLCDYVLGEADYLVLREPVHVALSDRTVSVGFHYLGDVNGTLRNVT
VMLWEANTNRTLTTKYLLTNQAQGTLQFECFYFKEAGDYWFVMIPEETDNGTRVPLWEKS
ASLKVEWPVFHIDLNRTAKAAEGTFQVGIFTSQPLCLFPVDKPDLLVDVIFKDSLPEART
SLGQPLEIRASKRTRLTQGQWVEFGCAPLGVEAYVTVMLRLLGQDSVIASTGPIDLAQKF
GYKLMMAPEVRCESVLEVMVLPPPCVFVQGVLAVYKEAPKAPEERTFQMAENRLPLGERR
SVFNCTLFDVGKNKYCFNFGILKKSHFSAKGCMLIQRNIETWGPWQPWSPCSTTCGDAVR
ERRRTCVTSFPSRPSCSGKPSETSPCSLEECAVFRPPDPSPDPEKYNNVVTVTGISLCLF
IIFATVLITLWRRFGRAPKCSTPARHNSIHSPGFRKNSDEENICELSEPRGSFSDAGDGP
RGSPGDTGIPLTYRCSASAPPEDEASGSESFQSNAQKIIPPLFSYRLAQQQLKEMKKKGL
TETTKVYHVSQSPLTDTVVDATASPPLDLECPEEAAASKFRIKSPFLDQPGAGPGERPPS
RLDGVLPPPSCAVSPSQTLIRKSQMRSTGGRDGSSERGHCRSSLFRRTASFHETKQARPF
RERSLSALTPRQAPAYSSRMRTWEQMEDRGRPPSRSAHLLPERPEHFQGAAGRASSPLGP
LSKSYTVGHPRRKPDPGDRQAGLVAGAAAEKMEPHRAHRGPSPSHRSASRKQTSPVFLKD
SYQKVSQLSPSHFRKDKCQSFPIHPEFAFYDNTSFRLTEAEQRMLDLPGYFGSNEEDETT
STLSVEKLVI
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccatgttgaaagacttttcaaatctcttgctggtggtgctctgtgactatgtc
cttggagaagccgactacctcgtcttacgagagccagtccacgtggcgctgagcgaccga
acggtgtcagtgggtttccactacctcggtgacgtcaacgggacactgaggaatgtgact
gtcatgctgtgggaggccaacaccaaccggactcttaccactaagtacctcctgaccaac
caggcccagggaacactccagtttgaatgcttctacttcaaggaggctggtgactactgg
tttgtgatgatcccagaagagacagacaatggcacacgagttcccctctgggagaaaagt
gcctctctgaaggtcgaatggcccgtctttcacatcgatttaaataggacagccaaggcg
gcagaaggcaccttccaagtgggtatttttacctcccaaccgctctgcctgtttcctgtg
gacaagccagacctgctggtggatgtcatcttcaaggacagccttcctgaggcaagaaca
agtttgggacagccgctggagatccgagccagcaaaaggacaagactcactcaaggccag
tgggtcgagtttggctgtgcacccctaggggtggaagcctacgttacggtgatgctgagg
cttttgggtcaagactcagtcattgcttcgacgggacctattgacctggcccaaaagttc
ggatacaaattgatgatggcaccggaagtcaggtgtgagtctgtcctggaggtgatggta
ctgccacctccttgtgtctttgtccaaggagtgctggctgtttacaaagaagcccccaaa
gccccggaggagaggaccttccagatggctgaaaacaggctgcccctgggagagaggaga
tcggtgtttaactgcactttgtttgatgtggggaagaacaagtattgctttaactttgga
attttgaagaaaagccatttttctgcaaagggatgcatgctaattcagagaaatatagaa
acttggggaccatggcagccgtggagcccgtgtagcaccacgtgcggggatgctgtccga
gagcgtcgccgcacgtgcgtcacttccttcccctccagacccagctgctctggaaagccc
tcagagacctctccatgctccctggaggagtgtgctgttttccggccaccagacccatcg
ccggacccggagaagtacaacaacgtggtgaccgtcacagggatatccctgtgcttgttc
atcatctttgccaccgtgctcatcaccctctggaggagattcggcagagcccccaaatgc
agcacgccggcccgccacaactccatccattcccccggcttccggaagaactcggatgag
gagaacatctgcgagctgagcgagcctcgcggaagcttctcggatgcgggggacgggccc
aggggaagcccaggggacacgggcatcccgttgacttaccggtgcagtgcgtcagcgcct
cctgaggacgaggcctccggcagtgagagctttcagtccaacgctcagaagatcatcccg
cccctgtttagctaccgcctggcccagcagcagctgaaggagatgaagaagaaagggctg
acagagaccaccaaagtgtaccacgtgtctcagagccccctgacagacacggtagtggat
gccactgccagcccccccttagacctggagtgccccgaagaggcagcagcaagcaagttc
cggatcaagtctccttttctggaccagcctggggcaggtcccggggaaaggcccccctcc
aggctggatggcgtcctgcctccgcccagctgtgcggtcagccccagccagacgctgatc
cgcaagtcccagatgaggtcgactggtgggagagatggctcgtcggagcggggccactgc
agaagttccctcttccggaggactgctagttttcacgaaaccaagcaggctcgccctttc
agggagaggagtttgtcagccctgactccccgccaggcccccgcctacagttccaggatg
aggacctgggagcagatggaggataggggtcggcctcccagtcgaagtgctcacctgctt
ccagagaggccggaacacttccaaggggcggcaggtcgggccagcagtcctttgggtcca
ctctccaaatcctacactgtggggcatcccaggaggaaacccgacccgggggatcgccag
gctgggttggtggcaggagctgctgcggagaaaatggagcctcaccgagctcacagggga
ccgtcccccagtcacaggagtgcgtcaaggaagcagacttcccccgttttcctcaaggac
agctaccagaaagtcagtcagcttagcccttctcacttcaggaaagataaatgccagagc
ttccccatccaccctgagttcgccttctacgacaacacctctttccgcctcaccgaggct
gagcagagaatgctggacctcccgggatactttggctccaacgaagaggacgaaaccact
agtacactgagcgtggagaagttagtaatctag
DBGET
integrated database retrieval system
