Rattus norvegicus (rat): 365407
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Entry
365407 CDS
T01003
Symbol
Cpsf7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform 2
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03015
mRNA surveillance pathway
rno03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
365407 (Cpsf7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
365407 (Cpsf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
365407 (Cpsf7)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
365407 (Cpsf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
365407
NCBI-ProteinID:
NP_001014267
RGD:
1305441
Ensembl:
ENSRNOG00000020668
UniProt:
Q5XI29
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All DBs
Position
1:216592745..216616860
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AA seq
462 aa
AA seq
DB search
MSEGVDLIDIYADEEFNQDSEFNNTDQIDLYDDVLTAASQPSDDRSSSTEPPPPVRQEPA
PKPNNKTPAILYTYSGLRSRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIPPRA
HSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPPPIPPPPPLS
SSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPNATVGPPPDT
YMKASTPYNHHGSRDSGPLPSTVSEAEFEEIMKRNRAISSSAISKAVSGASAGDYSDAIE
TLLTAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSVGASGSSSRKRHRSRERSPS
RSRESSRRHRDLLHNEDRHDDYFQERNREHERHRDRERDRHH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggagtggatttgattgatatatacgctgatgaagagttcaatcaggactcg
gagttcaacaacacagatcagattgacctatatgatgatgtgctgacggcggcctcacag
ccctcggatgacagaagcagtagcacagaaccaccccctcctgtccgccaggagccagct
cccaaaccaaacaacaagacccctgcaattctgtacacatacagtggcctgcggagtcgg
cgagcagctgtctatgtaggcagtttctcctggtggaccacagaccagcagctgatccag
gttattcgctctataggagtctatgatgtggtggagttgaaatttgcagagaaccgtgca
aatggccagtctaaagggtatgctgaggtggtggtagcctctgaaaattctgtccacaaa
ttgctggaactcttaccaggaaaagttcttaatggagaaaaagtagatgtgaggccagcc
actcggcagaacttatcacaatttgaggctcaggctcggaaacgaatacctccacgggcc
cactcccgagattctagtgattctgctgatggacgggcaaccccctctgagaatcttgta
ccctcatctgctcgtgtggataagccccccagcgtgttgccctactttaaccgtcctcct
tcagcccttcccctaatgggtctgcccccacccccaattccacccccaccacctctctcc
tcaagctttggtgtccctcctcctcctcctggtatccactaccagcatctcatgcccccc
cctcctcgattacctcctcatctggctgtacctccccctggggccatcccaccagccctt
cacctcaatccagccttcttccccccaccaaatgctacagtggggcctccaccagatact
tacatgaaggcctctacaccctataaccaccatggcagccgagattcaggccctctaccg
tctacagtgagtgaagctgaatttgaagagataatgaagcgaaacagagcaatttccagc
agtgccatttccaaagcagtgtctggagctagtgcaggggattacagtgacgccattgag
acactactcacagccattgcagttatcaaacagtcccgagtcgccaatgatgagcgttgt
cgggtcctcatctcttcacttaaggactgtcttcatggcatagaggccaagtcttacagt
gtgggtgccagtggaagctcttctaggaaaagacatcggtcaagggagaggtcacccagc
cggtcccgagagagtagcagaaggcaccgagacttgcttcataatgaagaccgacatgat
gattatttccaagaaaggaaccgggagcatgagagacaccgggatagagaacgggaccgg
caccactga
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