Rattus norvegicus (rat): 365476
Help
Entry
365476 CDS
T01003
Symbol
Cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X5
KO
K24223
cilia- and flagella-associated protein 43
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
365476 (Cfap43)
Cilium and associated proteins [BR:
rno03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
365476 (Cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_WDR5
ANAPC4_WD40
Beta-prop_WDR3_1st
CFAP43_N
Beta-prop_RIG_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
365476
NCBI-ProteinID:
XP_006231650
RGD:
1560545
Ensembl:
ENSRNOG00000036585
LinkDB
All DBs
Position
1:complement(256566558..256653816)
Genome browser
AA seq
1409 aa
AA seq
DB search
MHCWTPSSDLYVGCEEGHLLMINTETLKVTVLQKLEEFPVLDGAQLINPLTLVYQKDGIL
ASGIDGVIYSFIIKDTKYEVKPFLEFDGPVAHLAFSPSYKMLLIQTDKGSVYIYTFGTEP
VLDKLLEACDGKVQAISFITPGNKYFLTLTSSGEVSIFSIEDGTCTGRIFLRTHATTLAC
SPSSSSAAMGTVDGSVYFLNILDVESPQLIHQAFLSKSPVKILIYDQRGIFLLVGTEEGK
IFVIDARPSKSFQIFGYTESSKDMLQISTVSHVESDVVEVLVLSPLSETGRSRLEYFTLP
IMLPQVVPENFADERGRLKDNFTHRYLYEVEHALSSAVLGFSESKIYGFCSQVPYICSYT
MPVKEHTGICILKPQQKVQSKQYGAGTIYLSSHGLWLITIAKCGVLCIRDMFSLDTFVRC
RSHSHHGQGIQNMKMSMDGQHILVNGKDDNTLVYLKWKRLGSNIANEIFEHCHQLMLSLA
KTVETECDYLASPDYQCVPPEEETTEFQKKLSLYSSQEELAIDLNKIPWIQRKMEEAVKK
EVRIFTPRRKEIKRGIKELAQIIAAMMEENEKLDTIAKLDEQEFCLDAEELERLHDECEE
EVSKIRKDVEMHNLAKSYLTELIKEECWNSMAVKGRALKCFHIPYVVDNFPMKERTEEEL
LELSKVIQQKKTEIECLKLRKEIVEAQSAATMVKKHHEEEEEEEEEDEEKVVKSTSLPNY
LLGSLSTDFGADTSLLTNQLELHSREEKINQIILLKDIIYNIKKTFNSEFDAAYKQKEIE
IARVQEKNVRIAEIISDLELEEKVWQPVFEDSEKPERALVVEDDEISLQKYFAPWHKTKA
ELLTAFDAERLQQARLSDARHRGLMDMMGGVLEVKKEDILRMVIPQPPFMSKPDALWSEE
ERKQFKEYEKKVKELNEERDKYRKSLEAELKKLQNAIQENTQNFDEHLKRLFERRVKAEM
VINQEELKINNIVFSLLLDEELSSREQFLNNYLQKKQDEKTKTSEAIQKAREDLDVFKEN
HDTLVAEDKVLDRSFKKEFSDISGHQVDVLYKLFKRRPRVPKQKTQTEVNTLVPYGERPG
SGKLNKETFAQLMKSMDELDNVSNMPEGLDPSVWEHFCATRRAKVENEYKVKQKAACLLE
MTTFLRKRMEDDDVVHHEIERVFHELVRLQDEKVKFQVNLTVQILLKQGQVELENFQLTL
EYSDAILINKNIIEELNSVIRTQGQKKVASMMESKEVHKGIYQIEWEHKKMEMEMEDLNQ
KAWDIQMLFFSRDRQKYLNEPNYEGVIAIQIGIMEQTISVIDKNHKKNVENCKKLLKKLG
KCSNQKDVANYNLSCNLREELVAVSERQDICNEIGSKLTCEKIARERYDNLMKQQKLTNI
SKQQAEQISILQAEVERLRMKTFPALVPM
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgcactgctggactccgtcaagcgacctgtacgttgggtgtgaggagggtcatcttctg
atgattaacacggaaaccttgaaggtgactgtgctccagaagctggaggagtttccagta
ctggatggagcccagcttatcaatccactcacgctggtgtaccaaaaggacggcatactc
gcttctggaattgacggtgtgatatactcgttcatcatcaaagacacaaagtacgaagtg
aagcccttccttgagtttgatgggccagtggcacatttggcgttctcccctagttacaaa
atgttgctgattcaaacagacaaggggtctgtttatatctacacgtttggcacggagccg
gttctcgataaactcctagaggcctgtgacgggaaagtccaggccatcagctttatcacg
cctgggaacaaatacttcctgacgctcacgagttcgggggaagtttctattttttcgata
gaagatggcacttgtacgggcaggattttcctgaggactcacgcaacaactctggcgtgc
tctccttcttcctcatcggctgccatggggacagtggatggctctgtgtacttcctgaac
atccttgacgtggagtcccctcagctgattcaccaggccttcctctccaagtcgcctgtg
aagatactgatttacgaccagcgaggaatctttctgttagtcggtacagaagagggaaaa
atctttgtcatcgatgccagaccctcaaagtcattccagatttttggatacactgagtca
agcaaggacatgctgcagatatccacggtgtcacatgtggaatcggacgtggtcgaagtg
ctggtgttgtccccgctttcagaaacgggcagaagcaggctggagtacttcaccctgcct
atcatgttaccacaagtggtccctgaaaacttcgctgatgaaagaggacggctgaaggac
aacttcacccacaggtacctgtatgaggtggagcacgctctgtcctctgccgtgctgggc
ttctcagaatccaaaatctatggcttctgcagccaggtgccgtacatctgcagctataca
atgcctgtaaaggagcacaccggcatctgtatccttaagcctcaacaaaaagtccagagc
aaacagtatggagccggaacaatctatctgtcctctcacggattatggcttataacaata
gctaaatgtggagttctctgtatccgagatatgttcagtctggatacctttgttcgatgt
cggagtcattctcaccatggtcaagggattcagaacatgaaaatgtcaatggacggacag
cacatcctggtgaatgggaaagacgacaacaccctggtctacctcaagtggaagaggctt
ggatcaaacatagcaaatgagatctttgaacactgccatcaactaatgctcagtctggcc
aagaccgtggaaacagagtgtgactacctggcttcgccagattaccagtgtgtacctcca
gaagaagagacaactgaattccagaaaaagttgagcttgtactcatcccaagaggaatta
gccatcgatctcaataaaattccctggatccaacgaaaaatggaagaggccgtcaaaaag
gaggtgaggatttttacccctagacgaaaggagatcaaacgaggaatcaaggagctcgct
caaattattgcagctatgatggaagaaaatgaaaagctggacaccattgcaaagctggat
gagcaggagttttgcctggatgctgaagagctggaaaggcttcacgatgaatgtgaggag
gaggtatcgaagattaggaaagatgtggagatgcacaacttagccaagagctacttaact
gagcttatcaaggaagagtgctggaactcaatggctgtgaagggccgtgctctaaagtgt
tttcatataccctatgtggttgacaacttccccatgaaggagcgcacagaagaagaactg
ctggagctgagtaaagttatacagcaaaagaagactgagatagagtgtcttaagctccgg
aaggaaatcgtagaggcgcagtctgcagccactatggttaaaaagcaccacgaagaggag
gaggaggaagaggaagaggatgaagaaaaggtagtgaaaagtaccagtttgcccaattac
ctacttggtagtttgagcactgattttggggcagacacgtctctgttgacaaaccaattg
gaacttcattccagagaggagaaaatcaaccaaattatattgctaaaagatatcatttac
aatataaaaaagactttcaatagtgaatttgatgctgcctataagcaaaaagagattgaa
attgcacgcgtacaagaaaagaatgttaggattgcagaaatcatttcagacctggaattg
gaagaaaaagtctggcagccagtgtttgaagacagcgagaagccagaaagagcccttgtt
gtggaagatgacgagatttcacttcagaaatactttgctccttggcacaaaaccaaagca
gaattgctcacagcctttgatgcggagcgactgcaacaagctcggctctctgatgcaagg
cacaggggcctgatggacatgatggggggcgttctggaagtcaagaaagaagacatccta
aggatggtgatccctcagcctcctttcatgagcaaacctgatgctctgtggagcgaagag
gaaaggaagcaattcaaagagtacgagaagaaagtcaaggagctgaatgaagagagagac
aaatacagaaagtctttagaagcggaactgaaaaaacttcaaaatgctattcaagagaac
acacagaacttcgatgagcatttgaagagactctttgaaaggagagtgaaggcagagatg
gtcatcaaccaggaggagctgaaaataaacaacattgtgttttctttgctgctggatgaa
gaactcagctccagggaacagttcctgaacaactaccttcagaagaagcaggatgagaaa
accaagacttcagaagccatccagaaagcaagagaagacctggacgtgttcaaggagaac
catgacaccttagtggcagaagacaaagttctggatcgcagcttcaaaaaggaattttct
gacatttctggtcaccaggtggacgtactctacaaactttttaaacgtcggccaagggtt
ccgaaacagaaaacacagacagaggtgaacactcttgttccttatggagagcggccagga
tctggcaagttaaataaggaaacctttgcccagctaatgaagtccatggacgagttggac
aacgtcagtaacatgccagaaggcttggacccctcagtctgggaacatttctgcgcgact
agacgagcaaaagtggaaaatgagtacaaagtgaagcagaaggcggcctgcctgttggaa
atgaccacattcctccggaagagaatggaagatgacgatgtcgtacatcatgagattgag
agggtattccacgagctcgtccgattacaggacgagaaagtaaaattccaggtgaatttg
acagtgcagattcttcttaaacaaggacaagtggaactggagaatttccagttgactctg
gaatattctgacgcgattctcatcaataagaatataatcgaagagttgaattctgtgatt
cggactcaaggacaaaagaaagttgctagcatgatggaaagtaaagaggtccacaaaggg
atctatcagattgagtgggagcacaagaaaatggagatggagatggaggacctaaaccag
aaggcctgggacatccagatgctgttcttctcacgagatcggcaaaagtacctaaatgaa
cccaactacgagggcgtgattgctattcagattggaataatggagcaaaccatcagtgtt
atagataagaatcacaagaagaatgtagaaaactgcaaaaaactactcaagaagttggga
aaatgcagcaatcagaaagatgtagcaaattataacctaagctgtaatctacgggaggaa
ctggtggccgtctcagagagacaagacatctgtaatgaaatagggtctaagctgacctgt
gagaagatcgccagagaacgctatgacaacctgatgaaacagcagaagctgacgaacatc
tccaagcagcaagctgagcagatttcaattctgcaggcggaagtcgaaagactgaggatg
aaaacattccctgctctcgtcccaatgtag
DBGET
integrated database retrieval system
