Rattus norvegicus (rat): 366452
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Entry
366452 CDS
T01003
Symbol
Ptch2
Name
(RefSeq) protein patched homolog 2
Organism
rno
Rattus norvegicus (rat)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
366452
NCBI-ProteinID:
NP_001102445
RGD:
1309039
Ensembl:
ENSRNOG00000057616
UniProt:
A6JZB9
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All DBs
Position
5:135808856..135829087
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AA seq
1182 aa
AA seq
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MVRPLSLGELPPSYTPPARSSAPQILAGSLQAPLWLRAYFQGLLFSLGCRIQKHCGKVLF
LGLVALGALALGLRVAVIETDLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTAR
QEGANILTPEALGFHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPQQLLEELGPFASLEGFRELLDK
AQVGQAYVGRPCLDPDDPHCPPSAPNRHSRQAPNVAQELSGGCHGFSHKFMHWQEELLLG
GTARDLQGQLLRAEAFQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQASMVLQAWQRRFV
QLAQEALPANASQQIHAFSSTTLDDILQAFSEVSATRVVGGYLLMLAYACITMLRWDCAQ
SQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALGIGVDDIFLLAHAFTK
APPNTPLPERMGECLRRTGTSVALTSINNMVAFFMAVLVPIPALRAFSLQAAIVVGCNFA
AVMLVFPAVLSLDLRRRHRQRLDVLCCFSSPCSAQVIQMLPQELGDRAVPVGIAHLTATV
QAFTHCEASSQHVVTILPPQAHLLSPTSDPLGSELYSPGGSTRDLLGQEEGTRPKASCRS
LLCAHWTLAHFARYQFAPLLLQTQAKALVLLFFGALLGLSLYGATLVQDGLALTDVVPRG
TKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPAAQAPRT
WLHYYRSWLQGIQTAFDQDWASGRITRNSYRNGSEDGALAYKLLIQTGNAQEPLDFNQLT
TRKLVDKEGLIPPELFYMGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIP
AAQPLEFAQFPFLLHGLQKTADFVEAIEGARAACTEAGQAGVHAYPSGSPFLFWEQYLGL
RRCFLLAVCILLLCTFLVCALLLLNPWTAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVV
ILVASVGIGVEFTVHVALGFLTSHGSRNLRAARALEQTFAPVTDGAVSTLLGLLMLAGSN
FDFIIRYFFVVLTVLTLLGLLHGLLLLPVLLSILGPPPQVVQIYKESPQALSSTAPQRGG
LRWGVSPTLPQSFARVTTSMTVALHPPPLPGAYVHPASDEPT
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggttcggccactgtcccttggagagctgcctcccagctacacacctccagctcggtcc
tccgcacctcaaatcctagctgggagcctgcaggctcctctctggcttcgtgcttacttc
caaggtctactcttctccctggggtgcaggatccagaaacactgcggcaaagtgctcttc
ctaggactggtggctttgggggctctggcactgggtctccgagtggctgtaattgagaca
gacctagaacagctctgggtagaagtgggcagcagggtgagccaggagctgcattacacc
aaagagaagctgggggaggaggctgcctacacctcccagatgttgattcagactgcacgc
caggagggggcaaacatcctcacccccgaggcgcttggctttcacctccaggcagccctc
accgccagtaaagtacaagtctcactttatgggaagtcctgggatttgaacaaaatctgc
tacaaatcaggggttccccttattgaaaatggaatgatcgagcggatgattgagaagctg
tttccctgtgtgatcctcaccccgcttgactgcttctgggaaggagccaaactccaaggg
ggttctgcctacttgccgggccgccctgatatccagtggaccaacctggatccccagcag
ctcctagaggagctgggcccctttgcctctctggagggcttccgggagctgctagacaag
gcacaggtgggccaggcctatgtggggcgaccctgtctggaccctgatgacccccactgt
ccacctagtgctcccaaccgtcacagcaggcaggctcccaatgtggctcaggagctgagt
gggggctgccatggcttctcccacaagttcatgcactggcaggaggaactgctactgggg
ggcacagccagagatctccaaggacagctgctgagggcggaggccttccagagcaccttc
ctgctgatgagcccccgtcagctgtatgagcacttccggggcgactaccagacacatgac
atcggctggagtgaggagcaggccagcatggtgctgcaggcctggcagaggcgctttgtg
cagctagcccaggaggctctgccagccaacgcatcccagcagatccatgctttctcctcc
accaccctggatgacatcctgcaggcgttctcggaagtcagtgccacccgtgtggtagga
ggctatctgctcatgctggcctatgcctgcataacaatgctacggtgggactgcgcccag
tcccagggtgccgtcggtcttgctggggtgttgctcgtggccctggcggtggcctcaggt
cttgggctttgtgccctacttggcatcactttcaatgctgccactactcaggtactgccc
ttcttagctctgggcatcggtgtggatgacatcttcctgctggcacatgcattcacaaag
gccccacccaacactcctctcccagagcgcatgggtgagtgtttgcgacgcaccggcacc
agtgtggcactcacgtccatcaacaacatggtcgccttcttcatggctgttctggttccc
atccctgcgctgcgggctttctccctgcaggcagccatagtggtcggctgcaactttgca
gcggtaatgcttgtcttccccgctgtcctcagcctcgacctgcgccggcgccaccgccag
cgcctcgacgttctctgctgcttttctagcccctgctctgctcaggtcattcagatgctg
ccccaggaactaggggacagagccgtaccagtgggcattgcccacctgactgccactgtg
caagcttttacccactgcgaagccagcagccagcacgtagtcaccattttgcctcctcaa
gcccacctgctgtctccaacttctgacccactgggctctgaactctacagccctgggggg
tccacacgggaccttctcggtcaggaggaggggacgaggccaaaggcgtcctgcaggtct
ctgctctgtgcccactggactctcgcccattttgcccgctatcagtttgcgcctttactg
ctccagacacaagccaaggccctggtgttgctgttcttcggggctcttttgggtctgagc
ctctatggagccaccttggtccaagatgggctggccctgacagatgtggtccctcggggc
actaaggaacatgctttcctgagcgcccagctcaggtacttctccctgtacgaggtggcc
ctggtgacacagggtggctttgactacgcccactcccaacgcgccctctttgatctgcac
cagcgcttcagttccctcaaggctgtgctccccccacctgcggcccaggccccccgcacc
tggctgcactactaccgcagctggctacagggtatccagaccgcatttgaccaagactgg
gcttctgggcgcatcacccgcaactcttaccgcaacggctctgaagatggcgccctggcc
tacaagctgctcatccaaaccgggaatgcccaggaacctctggatttcaaccagctgacc
acaaggaaactggtggacaaggagggactcattcccccagaactcttctacatggggcta
accgtgtgggtgagcagcgaccccctgggcctagcagcctctcaggccaacttctacccc
ccacctccggaatggctgcatgacaagtacgataccactggagagaaccttcgcatcccg
gcagcccagcccttggagtttgcccagttccccttcctgttgcatggactccagaagact
gcagactttgtggaagccatcgaaggggcccgggcggcatgcacagaggcaggccaggca
ggggtgcacgcctaccccagtggctctccctttctcttctgggagcagtacctgggcctt
cggcgctgcttcctcttggcggtctgcatcttgctgctctgcaccttcctcgtctgtgct
ctgctcttactcaacccgtggacagctggcctcatagtgctggtcctggcgatgatgact
gtggagctctttggtatcatgggattcctgggcatcaaactgagtgccatccccgtggta
atcctcgtggcctctgtaggcatcggtgttgaattcacggttcatgtggctctgggcttc
ctgaccagccatggtagccggaacctgcgggctgctcgcgctctggagcagacctttgcc
ccagtgactgatggagctgtctctacattgctgggtctgctcatgcttgctggttctaac
tttgacttcatcataaggtacttcttcgtggtgctgacggtgctgacactcttgggcctg
ctccatggactcctgctgcttcctgtgctgctgtccatcctgggccccccaccacaggtg
gtccagatatacaaggagagtccacaggccctaagctccacagccccacagaggggtggg
ctcaggtggggcgtgtcccccaccctgccccagagttttgccagagtgactacctccatg
actgtggccctccacccaccaccactacctggagcatacgtccacccagcctccgatgag
cccacgtag
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