Rattus norvegicus (rat): 366980
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Entry
366980 CDS
T01003
Symbol
Arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03082
ATP-dependent chromatin remodeling
rno05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
366980 (Arid2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
366980 (Arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
366980 (Arid2)
03021 Transcription machinery [BR:
rno03021
]
366980 (Arid2)
03036 Chromosome and associated proteins [BR:
rno03036
]
366980 (Arid2)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
ARID
366980 (Arid2)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
366980 (Arid2)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
366980 (Arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
EAD2
Motif
Other DBs
NCBI-GeneID:
366980
NCBI-ProteinID:
XP_345868
RGD:
1311105
Ensembl:
ENSRNOG00000004831
UniProt:
D3ZJU0
LinkDB
All DBs
Position
7:129326371..129443813
Genome browser
AA seq
1826 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWREKTDRDFVKFWKDI
VDDNEVRDLISDRNKAHEDTPGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
SNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVTSTLE
VLYMLTEMGDIACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
MRPQAIEQVQTQSHGAPGPACRAVVAQHAAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSSGQAHIHVIGVR
RRALPLPIQMYYQQQPVSTPVVRVDAVADVSPTPSPAGIPHGSQAVGNHFQRTPVTNQSS
NLTATQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQNSPVTVIQNKAPIPCEVVKATVIQ
NSVPQTAVPVSIAVGGPAQSSLAQNHSAGPQPVTVVNSQTLLHHPSVMPQPSPLHTVVPG
QIPSGTPVTVIQQTVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPMHTSSQQTAAGSQ
PQDTVIIAPPQYVTTSASSIVSATSVQNFQVATGQVVTIAGVPSPQPSRVGFQNIAPKPL
PSQHVSSTVVQQPVQQPQQPAQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPTGQTVQ
LTGQPNITPSSSPSPVPATSNQVPAAMSSSSTLQSQGPPPTVSQMLSVKRQQQQQHSPAA
PAQQVQVQVQPPQVQVQVQPQQAGAGVGQPASSESSLIKQLLLPKRGPSTPGGKLILPAP
QIPPPNNARAPSPQVVYQVANSQAAGFGAQGQTPAQQLLVGQPNVQLVQSAMPPTGGVQT
VPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNAAQLIAPAGIS
MSGAQAGAGLQVQTLPAGQSACTSAAPPFKGDKIICQKEEEAKEATGLHVHERKIEVMEN
PSCRRGTTNTSNGDTSESETQVGSLLNGRKYSDSSLPPSHSGKLQSEPNPCSPLSNGPSL
ELGENGASGKQNSEPVDMQDVKSDLKKTLVNGICDFDKGDGSHLSKNIPNHKTCNHVGNG
EVSPVEPQGTLGATQQETAKGDQLERVPNGPALTLGGSPATSSVQEASSVATQPFSGTDL
PNGPLASGLTSDVPHQRPSVVVSPRPTAPVIQGHPVIAAPHSGSRGPASALSSDARSTNG
TAECKTVKRPAEDGDREAAPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKV
AIGSAAQQKPPPPPAYAQSALPQNTPMPPSPAVQVQGQPSSSQPSPVSASSQHADPVRKP
GQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQD
KHCSKDALLAGLKQDEPGQAANQKSSTKQPTVGSTGSAPRAQKAIASHPSAALMALRRGS
RNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEAS
STLAKCLYELNFTVQSKEQEQDSEML
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggaggaagggactggctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccgtttaagaagatccctgcggtg
ggtgggaaggagctggatcttcacgggctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttatctagaaaagtac
gagaaagttcaccatttcggggaagatgatgatgaggtaccaccgggcaatccaaagcca
cagctccctattggtgcgattccgtcttcctacaactaccagcagcacagcgtgtcagat
tatctacgtcaaagttatgggttatctatggattttaattcgccaaatgattataataaa
ctggtgctttcactgttatctggactcccaaacgaagtggacttcgccattaatgtgtgc
actctcctctcaaacgaaagcaagcacgtcatgcagcttgaaaaagatcccaaaatcatc
actttattacttgctaatgctggggtgtttgatgacactttaggctcgttctctactgtc
tttggagaagaatggcgagagaagactgacagagactttgttaagttttggaaagacatt
gtggatgacaatgaagtgcgagatctcatttctgacagaaacaaggctcatgaagataca
ccaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaacgac
atcgaaggacagcgggttcttcagattgcagtgattttgcgaaacctttcctttgaggag
agcaatgttaagctcttggcagctaatcgcacctgtcttcgtttcctattactctctgca
catagtcattttatttcattaaggcaattaggccttgacacgttaggaaatattgcagct
gagcttttactggaccctgttgatttcaaaaccactcatctgatgtttcatactgttacg
aaatgcctgatgtcaagggataggtttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaggataatggtgttttgatttgtgaatatgtggatcaagattcatat
agagagataatttgtcacctcactttgcccgatgtgctgcttgtaacctcaactctagag
gtgctctacatgctcaccgaaatgggggacattgcctgcacaaagatcgcaaaagtagaa
aagagcatagacatgctcgtgtgtctggtttccatggacattcagatgtttggccctgat
gcactagctgcagtgaagcttgttgaacatccaagctccagtcaccaagttttatctgaa
atgaggccacaggctatagagcaggtccaaacccagagccacggggcacctggcccagct
tgcagagcagttgtagcacagcacgccgctccccctccaggcatcgtggaaatagacagt
gagaagttcgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttcagtc
tctcgggcagaaatgtattccgagtatctctcaacttgtagtaaattagctcgtggtggc
atcctcacatcgactgggttttacaagtgtcttagaacagtttttccaaatcacacagtg
aagagagtggaagactccagtagcagcgggcaggcacatatccacgtcataggtgtgaga
cggagggctctgccgctgcccattcagatgtactatcagcagcagccggtttcaactccc
gttgttcgagtcgatgctgttgctgacgtgtctccaactccttcacctgcaggaatccct
cacggatcacaagctgtgggaaatcattttcagaggactcctgtcaccaatcaatcttca
aatttgactgcaacacaaatgtcttttccagtacaaggcgttcatactgtggcacagact
gtttctagaattccaccgaatccttcagttcatacccaccagcaacaaaattctccagtg
actgtcattcagaataaagctccaattccctgtgaagtcgttaaggcaacagtaatccag
aactctgtcccccagacagcagttcctgtgagtatcgctgttggaggacctgcacagagc
tctttagctcagaatcatagtgcagggccacagcctgttacagttgtaaattctcagaca
ttgcttcaccatccctctgtgatgccacagccatctccactacacacagtggtgccagga
cagatcccgtcaggaactcctgtcacagtaatccagcaaactgtaccacagagtcatata
tttggacgagtacagaacataccagcatgtacgtccacagtttcacagggtcagcagtta
atcaccacgtcaccacagcctatgcacacgtcatctcaacagacagcagctggtagccag
ccacaggacactgtcatcatagcacctccacagtacgtaacaacttctgcatccagtatc
gtctcagcaacttcagtacagaatttccaggtagctacgggacaggtagttaccatagct
ggtgttccaagtccacaaccctccagggtgggattccagaacattgcacccaagccgctt
ccttctcagcacgtttcatcgacagtggtacagcagcctgttcaacaaccacagcagcca
gcccagcaaagcgtagtgatcgtaagccagccagctcagcaaggccagacttacgcacca
gccattcaccaaattgttcttgctaacccggcagctctcccaactggtcagacagttcag
ctgactggacaaccaaacataactccatcttcttcaccatcacctgtcccagctactagt
aaccaagtccctgcggccatgtcatcttcttccacccttcagtcacagggaccccctcct
actgtcagtcagatgctgtctgtgaagaggcagcagcagcagcagcattcaccagcggcg
ccagcacagcaggtccaggtccaggtgcagccgccgcaagtccaggtgcaagtgcagccc
cagcaggcgggtgcaggagttggtcagcccgcttccagcgagtctagtctgataaaacag
ctgctgctcccaaagcggggcccttccaccccagggggtaagcttatcctcccagcccca
cagattcctccccctaacaatgccagagcccccagcccccaggtggtctatcaggtggcc
aatagccaagcagctggctttggcgcgcaggggcagacccctgctcagcagctgctggtt
ggacagccaaatgttcagttggtccaaagtgcaatgccacccacggggggagtgcaaact
gtgcccatttccaacttacaaatactgccgggtccactgatctcaaacagcccagcaacc
attttccaagggacttccggcaaccaggtaactataacagttgtgccaaataccagtttt
gcaactgcgactgtgagtcagggaaacgcagctcagctcatcgctccagccggtattagc
atgagtggggcgcaggccggagctggacttcaggtgcagacgcttccagccggacagtca
gcgtgtaccagcgctgcccccccattcaaaggcgataagatcatttgccaaaaggaggag
gaggcaaaggaagcaacaggtctacatgttcatgagcggaaaatcgaggtcatggagaat
ccttcctgccgacgaggaaccacgaacaccagcaatggggacacgagtgagagtgagacc
caggtggggagcctgttaaacgggagaaagtacagtgactcaagtctacctccttcacac
tcagggaaacttcagagtgagcccaacccgtgctcaccactcagcaatgggccatcgttg
gaattaggtgagaatggagcatctggaaaacagaactcagaaccagtggacatgcaggat
gtcaaaagtgatctgaaaaaaacccttgttaatggaatctgtgattttgataaaggagat
ggttctcatttaagcaaaaacattccaaatcacaaaacttgtaatcatgtaggaaacggt
gaggtatctccagtggagccacaggggactttgggtgccacccagcaagagactgccaaa
ggcgaccagctagaaagagttcccaatggacccgcgttaactctgggtgggtcaccggcc
accagcagtgtgcaagaagcttcgagtgtggcgacacagccattcagtggtactgacttg
cctaacggacctctagcttcaggtttgacttcagatgtgcctcatcagcgcccaagtgtg
gttgtctcaccgcgtcctacagcccctgtcatacaggggcacccggtcatagcagctccc
cactcaggatctagagggcccgcctccgctctgtcatctgacgctcggtctacaaacggc
acagccgagtgcaaaactgtgaagaggccagcagaggatggcgatagggaagcagccccg
ggaattccaaataaagtaggggtcagaattgtcacaatcagcgaccccaacaatgctggc
tgcagtgccaccatggtggctgtcccagcaggcgccgacccgagcactgtagctaaagta
gcaataggaagcgcagctcagcagaagccgccgccgccgccagcctacgcgcagagcgcg
ctcccacagaacactcctatgccaccttcaccagctgttcaggtgcagggccagcctagc
agttctcagccttctccagtcagtgcgtccagtcagcatgcagatccagtgagaaaacct
gggcagaacttcatgtgtctgtggcagtcttgtaaaaagtggtttcagacgccgtcacaa
gtgttctaccacgcggccactgaacatggagggaaggatgtgtacccggggcagtgcctc
tgggaaggctgcgagcccttccagcggcaaaggttctcgttcatcacccacttacaggac
aagcactgttcaaaggacgctctgcttgcagggttaaaacaagatgaaccaggacaagcg
gcaaatcaaaaatcttctaccaagcagcccactgtggggagcacaggctctgctcccaga
gcccagaaggccattgcaagccaccccagtgctgcactcatggctctgcggagaggctcg
aggaaccttgtcttccgggactttacagatgaaaaagagggaccaataactaaacacatc
cgactaacagctgccttaatattaaaaaatattggtaaatactcagagtgtgggcgcaga
ttgttaaaaagacatgaaaacaacttatcagtgctagccattagtaacatggaggcttcc
tctacccttgccaaatgcctttatgaacttaattttacagttcagagtaaagaacaagaa
caagactcagaaatgctgtag
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integrated database retrieval system
