Rattus norvegicus (rat): 497770
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Entry
497770 CDS
T01003
Symbol
Scn3a
Name
(RefSeq) sodium channel protein type 3 subunit alpha
KO
K04836
voltage-gated sodium channel type III alpha
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
497770 (Scn3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
497770 (Scn3a)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
497770 (Scn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
497770
NCBI-ProteinID:
NP_037251
RGD:
3635
Ensembl:
ENSRNOG00000005007
UniProt:
P08104
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:complement(70554496..70666198)
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AA seq
1951 aa
AA seq
DB search
MAQALLVPPGPESFRLFTRESLAAIEKRAAEEKAKKPKKEQDIDDENKPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYVSKKTFVVLNKGKAIFRFSATSALYILTPLNPVRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCL
EDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPSDSAFETNTTSYFNGTMD
SNGTFVNVTMSTFNWKDYIADDSHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAVAAASAASRDFSGIGGLGE
LLESSSEASKLSSKSAKEWRNRRKKRRQREHLEGNHRADGDRFPKSESEDSVKRRSFLLS
LDGNPLTGDKKLCSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDVGSENDFADDEHST
FEDSESRRDSLFVPHRPGERRNSNGTTTETEVRKRRLSSYQISMEMLEDSSGRQRAMSIA
SILTNTMEELEESRQKCPPCWYRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITIC
IVLNTLFMAMEHYPMTQQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDG
IIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKSYKECVCKINVDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMW
DCMEVAGQTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVG
RMQKGIDFVKNKIRECFRKAFFRKPKVIEIQEGNKIDSCMSNNTGIEISKELNYLKDGNG
TTSGVGTGSSVEKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEES
KEKLNATSSSEGSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPFCQVSTEEGKG
KIWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTY
IFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRAL
RPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTT
GNMFEIKEVNNFSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDS
RDVKLQPIYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDD
QSKYMTLVLSRINLVFIVLFTGEFLLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAEL
IEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
AIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPD
AIHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDD
FEMFYEVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHC
LDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAAIIQR
NYRCYLLKQRLKNISSKYDKETIKGRIDLPIKGDMVIDKLNGNSTPEKTDGSSSTTSPPS
YDSVTKPDKEKFEKDKPEKEIKGKEVRENQK
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggcactgctggtacccccgggacctgagagcttccgccttttcactcgagaa
tctcttgctgctatcgaaaagcgtgctgcagaagagaaagccaagaaacccaagaaagag
caagacattgacgatgagaacaaaccaaagccaaacagcgacttggaagctgggaagaac
cttccatttatctatggagacattcctccagagatggtgtcggagcccctggaggacctg
gacccctactatgtcagtaagaaaacttttgtagtgttgaataaagggaaggcgattttt
cgattcagcgccacctccgccctgtatattttaactccgctaaaccctgttaggaaaatt
gccattaagattttggtacactctttgttcagcatgcttatcatgtgcactattttgacc
aactgtgtatttatgacgttgagtaatcctcccgactggacaaagaatgtagagtatacg
ttcactgggatctatacctttgagtcacttataaagatcttggcaagagggttttgctta
gaagatttcactttcctccgtgacccatggaactggctggatttcagtgtcatcgtgatg
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgagaacgttcagagtt
ctccgagcattgaaaacaatatcagtcattccaggtttaaagaccatcgtgggggccctg
atccagtccgtgaagaagctgtccgacgtcatgatcctcaccgtgttctgtctcagtgtc
tttgctctaatcgggctgcagctcttcatgggcaacctgaggaataaatgcttgcagtgg
cccccgagcgattcggcttttgaaaccaacactacttcctacttcaatggcacaatggat
tcaaatgggacatttgttaatgtaacaatgagcactttcaactggaaggattatatcgca
gatgacagtcacttttatgtcttggatggacaaaaagatcctttactctgtggaaatggc
tccgatgcaggacaatgtccagaagggtacatctgtgtgaaggctggacgaaaccccaac
tacggctacacaagctttgacaccttcagctgggccttcttgtccctgtttcgactcatg
actcaggactactgggagaatctttaccagttgacattgcgtgcagctgggaaaacctac
atgatatttttcgtcctggtaattttcttgggctcgttttatttggtgaacttgatcctg
gctgtggtggccatggcctatgaggagcagaaccaggccacactggaggaggctgaacag
aaggaggcagagtttcagcagatgctggagcaactgaagaagcagcaggaggaggctcag
gcagtggctgcagcctccgcggcatccagagacttcagtggaataggagggttaggagaa
cttctggagagttcttcagaagcttccaagttgagctccaagagtgctaaggagtggagg
aaccggaggaagaagaggagacagagggaacacttggagggaaaccacagagccgatgga
gacaggtttcccaagtcggaatcggaagacagtgtcaaacgaagaagcttcctgctctcc
ctggatggcaacccgctgactggtgacaagaagctgtgctctccccaccagtctctcttg
agtatccgtggctccctgttttccccaagacgcaatagcaaaacgagcattttcagcttc
agaggtcgggcgaaggacgtggggtctgagaatgactttgcagacgatgagcacagcacc
ttcgaggacagcgagagcaggagagactccctgtttgtgccgcacagacctggagagcga
cgcaacagtaacggtaccaccactgaaacggaagtcaggaagagaaggctaagttcttac
cagatttcgatggaaatgctggaggattcctctggaagacaaagagccatgagcatagcc
agtatcctgaccaacaccatggaggaacttgaagaatctagacagaagtgcccaccatgc
tggtatagattcgccaatgtgtttttgatctgggactgctgtgatgcatggttaaaagtg
aagcatcttgtgaatttaattgtgatggatccatttgttgatcttgccataacaatttgc
atcgtattaaatacactgttcatggccatggagcactatcccatgacccagcagttcagc
agtgtgctgactgtgggaaacctggtcttcactgggatcttcacagccgaaatggtcctt
aaaatcattgccatggacccctattattatttccaagagggctggaatattttcgatgga
attattgttagcctgagtttaatggagctaggcctggcaaatgtggaggggctgtctgtg
cttcggtccttcagactgctccgagtcttcaagttggcaaagtcctggcccacactgaac
atgctcattaagatcatcggcaactcggtgggcgcactgggcaacctgaccctggtgctg
gccatcatcgtcttcatttttgccgtggtcggcatgcagctgtttggaaagagctacaag
gagtgtgtctgcaagatcaatgtggactgcaagctgccgcgctggcacatgaacgacttc
ttccactccttcctgatcgtgttccgagtgctgtgtggggagtggatagagaccatgtgg
gactgcatggaggtcgcgggccagaccatgtgccttattgtgttcatgttggtcatggtg
attgggaaccttgtggttctgaacctctttctggccttattgttgagttcctttagttca
gataaccttgctgctactgacgatgataacgaaatgaacaacctccagatcgcggtggga
aggatgcaaaagggaattgattttgtgaaaaataagatacgggagtgcttccgaaaagcg
tttttcagaaagccgaaagtgatagaaatccaagaaggcaacaaaatagacagctgcatg
tccaataacacgggcatcgaaataagcaaagagcttaactaccttaaagacggtaatgga
accaccagcggcgtgggaaccggaagcagtgtggaaaaatacgtaatcgatgaaaatgac
tacatgtcattcataaacaatcccagcctcaccgtgactgtgccaattgctgtgggagag
tctgactttgaaaatttaaatacggaagagttcagcagtgagtcagaattggaagaaagt
aaggagaaattaaatgcaaccagctcttctgaaggaagcacagttgatgttgctccaccc
cgagaaggtgaacaagcagaaattgaacctgaggaggaccttaagccagaagcttgtttt
actgaagggtgcattaaaaaattccccttctgtcaagtaagtacagaagaaggtaaagga
aaaatatggtggaatcttaggaagacatgctacagcattgtggagcacaactggtttgaa
acgttcattgtgttcatgattctcctcagtagtggcgctttggcctttgaggatatatac
attgagcaacgaaagacgatcaagaccatgctggagtatgcagacaaggtcttcacgtac
atcttcatcctggagatgctcctcaaatgggtggcctatggatttcaaacctatttcacc
aatgcctggtgctggttggacttcctgatcgttgatgtttctttggttagcctggtagcc
aatgctcttggttactcagaacttggtgccatcaaatccctacggacactgagagctctg
aggccactccgagccttatcccgctttgaaggcatgagggtggttgtgaatgctcttgtt
ggtgcaattccctccatcatgaatgtgttattggtgtgtctcatcttctggctgattttt
agcatcatgggtgtgaatctgtttgctggaaagttctatcactgtgttaacacgacaaca
ggcaacatgtttgaaataaaagaagtgaacaatttcagtgactgtcaggctcttggcaag
caagcccggtggaagaatgtgaaagtcaactttgacaacgttggggctggctacctggca
ttgctgcaagtggccacattcaaaggctggatggacatcatgtatgcagctgttgattcg
cgggacgtcaaactgcagcccatatatgaagaaaacctgtacatgtacctgtactttgtc
atcttcatcatcttcggctcgttcttcactctaaatctattcatcggtgtcatcatagac
aacttcaaccagcagaagaagaagtttggaggtcaagacatctttatgacagaagaacag
aagaaatactacaatgcaatgaagaagctcggctcaaagaaacctcagaagcccatccct
cggcctgcaaacaaatttcaagggatggtctttgattttgtaaccagacaagtgtttgac
atcagcatcatgatcctcatctgcctcaacatggtgaccatgatggtggaaacggatgac
cagagcaaatacatgaccctggttttgtcccgaatcaacctagtgttcattgtcctcttc
actggggagtttctgctgaagctcatctccctcagatactactacttcacgatagggtgg
aacatctttgactttgtggtggtgattctctcgattgtaggaatgtttctcgcggagctg
atagagaagtatttcgtgtcccctaccctgttccgagtcatccgcctggccaggattgga
cgaatcctacgcctgatcaaaggcgccaaggggatccgcactctgctctttgctttgatg
atgtcccttcctgcgctgttcaacatcggcctcctgcttttcctggtcatgttcatctac
gccatctttgggatgtccaactttgcctacgttaaaaaagaggctggaattgatgacatg
ttcaactttgagacttttggcaacagcatgatctgcttgttccaaatcaccacctctgcc
ggctgggacggactgctggcccccatcctcaacagcgcacctcccgactgtgaccccgat
gcaattcaccctggaagctcggtgaagggggactgtgggaacccatccgtggggattttc
ttttttgtcagctacatcatcatatccttcctggtggtggtgaacatgtacatcgctgtc
atcctggagaacttcagcgtcgccaccgaagaaagtgcagagcccctgagtgaggacgac
tttgagatgttctacgaggtctgggagaagttcgaccctgacgccactcagttcatagag
ttctgcaagctctctgactttgcagctgccctggatcctcccctcctcatcgcaaagcca
aacaaagtccagctcattgccatggacctgcccatggtgagtggagaccgcatccactgc
ctggacatcttgtttgcttttacaaagcgggtcctgggcgagagtggagagatggacgct
cttcgaatccagatggaagaaaggttcatggcttccaacccctccaaggtctcttatgag
cccattaccaccaccctgaaacggaaacaagaggaggtgtctgctgctatcattcagcgt
aattatagatgttatcttttaaagcaacggttaaaaaacatatcgagtaaatacgacaaa
gagacaatcaagggaaggattgacttgcctataaaaggagatatggttattgacaaattg
aatgggaattccaccccagaaaagacggatgggagttcctccacaacctctcctccttcc
tatgacagtgtaacaaaaccagataaggaaaagtttgagaaagacaaaccagaaaaagaa
atcaaagggaaagaggtccgagagaatcaaaagtaa
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integrated database retrieval system
