Rattus norvegicus (rat): 498286
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Entry
498286 CDS
T01003
Symbol
Slamf1
Name
(RefSeq) signaling lymphocytic activation molecule precursor
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
rno04517
IgSF CAM signaling
rno05162
Measles
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
498286 (Slamf1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
498286 (Slamf1)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
498286 (Slamf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
498286 (Slamf1)
04090 CD molecules [BR:
rno04090
]
498286 (Slamf1)
Cell adhesion molecules [BR:
rno04515
]
Immunoglobulin superfamily
SLAM/CD2 family
498286 (Slamf1)
CD molecules [BR:
rno04090
]
Proteins
498286 (Slamf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
Ig_3
Ig_2
ig
Receptor_2B4
V-set
Motif
Other DBs
NCBI-GeneID:
498286
NCBI-ProteinID:
NP_001102548
RGD:
1560634
Ensembl:
ENSRNOG00000059073
UniProt:
A6JG08
D3ZAD7
LinkDB
All DBs
Position
13:86802708..86837890
Genome browser
AA seq
345 aa
AA seq
DB search
MDPNRSLSLRILLFLSLAVELSYGTGTGMMDCPVILQELGRDTWLALTNEHQINKSANKS
IRILVTMARSPGSKTNKKIVSFDLSKGGYPDHLEDGYQFQSKNLSLKILGNRRESEGLYF
VTVEENVSVHQSCTQLKLYEQVSTPEIKVLNKTQEENGTCHLLLACTVKRGDNVSYSWGD
EAGTRLPSQANRSHLLHLILSNQHQDSIYNCTASNPVSSRSRTFNLWQQCRPESYSESSL
WLPYIAAPLGVIIFVILVSIATVLVKRYWAPSGKPNHCQPPVEEKSLTIYAQVQKSGPLE
KELHDALTDQDPCTTIYVAATEPVPESVQEPNPTTVYASVTLPES
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaaccgatccctttccttgagaatacttctgtttctctccctggctgttgag
ttgagctacggaacaggtacaggtatgatggactgcccggtgattctccaggagctggga
cgtgacacatggctggccctgacaaatgaacatcagattaataagagcgcgaacaaaagc
atccgcatccttgtcacgatggcaaggtctccaggaagcaaaaccaacaagaaaatagtg
tcttttgatctctcgaaagggggctacccagatcacctggaggatggctaccagtttcaa
tccaaaaacctaagcctgaagatcctagggaacaggagggagagtgaaggcttgtacttt
gtgaccgtggaagagaacgtgtcagtccatcaatcctgcacgcaactgaagctttatgaa
caggtctccactccagagattaaagtgctaaacaaaacccaggaggagaatgggacctgc
cacttgctgctagcctgcacggtgaagagaggggataatgtgtcttacagctggggtgat
gaggcaggtacccgtctgccaagccaagccaaccgctcccacctcctgcacctcatcctt
agcaaccagcatcaggacagcatctacaactgcacagcgagcaatcctgtcagcagtcgc
tctcggaccttcaacctatggcagcaatgcaggccagaatcctactcagaatcgagtctg
tggcttccgtatattgctgcaccattaggggtcatcatattcgtcatcctggtttccata
gcaacagtattggtgaaaagatactgggctcccagtggtaaaccaaatcactgccagcca
cctgtagaagaaaaaagccttactatctatgcccaagtacagaaatcagggcctctagag
aaggaacttcatgatgccctgacagatcaggacccctgcacgaccatttatgtggctgcc
acagagcctgtcccagaatctgtccaggaaccaaaccccaccacagtttatgccagtgtg
acactgccagagagctga
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