Rattus norvegicus (rat): 498638
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Entry
498638 CDS
T01003
Symbol
Msr1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform 1
KO
K06558
macrophage scavenger receptor 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
498638 (Msr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
498638 (Msr1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rno04090
]
498638 (Msr1)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Phagocytosis
Scavenger receptors
498638 (Msr1)
CD molecules [BR:
rno04090
]
Proteins
498638 (Msr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
Crescentin
DUF16
FlaC_arch
DUF2371
KxDL
ERM_helical
THOC7
Seryl_tRNA_N
AAA_13
EMP24_GP25L
Cob_adeno_trans
Muted
Cluap1
bZIP_1
NPV_P10
Motif
Other DBs
NCBI-GeneID:
498638
NCBI-ProteinID:
NP_001178868
RGD:
1564316
Ensembl:
ENSRNOG00000012779
LinkDB
All DBs
Position
16:59421250..59507070
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AA seq
454 aa
AA seq
DB search
MIEKQRLCPPEPEDADCYSESVKFDARSMTASLPHNTINGSSVQEKLKSFKVALVALYLL
VFAVLIPVVGIVTAQLVNWEMKNCLVGSANTSDTSQTLTGKENTSKAEMGFTIAMERMKA
LEERVQSISDSKAGLLDTDRFQNFSMATDQRLNDLLLQLNSLISSVQEHGESLDAISKSL
QSLNTTLLDVQVHTETLNVKVRESTAKQQEDISKLEERVHKVSAEIQSVKEEQEHVEQEV
KQEVKVLNNITNDLRLKDWEHSQTLKNITLIQGPPGPPGEKGDKGLTGQSGPPGVPGARG
PPGPKGDQGPVGFPGGRGYPGAPGKAGRSGFPGPKGQKGEKGRAGISTSLKTVRLVDGSG
PHEGRVEIFHEGQWGTICDDRWDIRAGQVVCRSLGYQDVLTVHKRAHFGQGTGPIWLNEV
MCFGRESSIENCKISKWGELGCSHAEDAGVTCTS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatagagaaacagaggctctgtcctcctgaaccggaggacgctgactgctactcagaa
tctgtgaaatttgacgcacgttccatgacagcatcccttcctcacaacactataaatggc
tcctccgttcaggagaaactgaagtccttcaaagttgccctcgtcgctctctacctcctt
gtgtttgcagtactaatacctgttgttggaatagtaacagctcagcttgtgaattgggaa
atgaagaactgcttagtgggttcagctaacacaagtgatacatcgcaaactctgactgga
aaagaaaacaccagtaaagcagaaatgggatttacaattgccatggaacgcatgaaggcc
ttggaggagagagtccaaagcatttcagactcaaaagctggccttctagacacagaccgc
ttccagaacttcagcatggcaaccgaccaaagacttaatgatcttcttctgcagttaaat
tccttgatttcatcagtccaggaacatggggagtccctggatgcaatttccaagtccttg
cagagtctgaatacaacactgcttgatgtccaggtccatacagaaacactgaatgtcaaa
gtccgcgaatctacagcaaagcaacaggaggacatcagtaagttggaggaacgtgtgcac
aaagtatcagcagaaatccagtctgtgaaagaagaacaagagcatgtggaacaggaagta
aaacaggaagtgaaagtattgaacaacatcaccaacgacctcagactgaaggactgggaa
cactcacagacgctgaaaaatatcaccttaattcaagggcctcctggacccccaggtgaa
aagggagacaagggacttactggacaaagtggtccacctggtgttccaggtgcaagaggt
cctccaggtcctaaaggtgatcagggaccagttggcttccctggtgggcgaggataccca
ggagcaccaggaaaggcagggaggtcaggatttcctggacctaaaggacaaaagggagaa
aaggggcgtgcaggaatatcaacctctcttaaaacagttcgactggttgatggtagcgga
ccccatgagggccgagtagagatcttccacgaaggccagtggggcacaatctgtgatgat
cgctgggatatacgagctggacaagttgtctgccggagtctaggataccaagatgttcta
actgtgcacaagagagctcactttggacaaggtactggtccaatatggctgaatgaagtg
atgtgctttgggagagaatcgtctattgaaaactgtaaaatcagcaaatggggagaatta
ggctgttcacatgcagaagatgctggggtcacttgtacttcataa
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