Rattus norvegicus (rat): 498918
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Entry
498918 CDS
T01003
Symbol
Irx5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
498918 (Irx5)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
498918 (Irx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
498918
NCBI-ProteinID:
NP_001025215
RGD:
1565518
Ensembl:
ENSRNOG00000011180
UniProt:
Q45V74
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Position
19:complement(30812033..30816885)
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AA seq
484 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGADPAAAAAAAFSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNAT
RDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFVNARRRLKKENKMTWTP
RNRSEDEEEEENIDLEKNDEDEPQKPEDKGDLEGPEAGGTEQKAAAGCERLQGPLSPAGK
ETEGSLSDSDFKESPSEGRHDDLPRPPRAGEPSPAGPATARLAEDAGPHYPAGAPAPGPH
PSAGELPPGSGGSSVIHSPPPPPPPPPAVLAKPKLWSLAEIATSSDKVKDGGGGSEGSPC
PPCPGPIGGQTLGGSRASPAPAPARSPSAQCPFPGGTVLSRPLYYTAPFYPGYTNYGSFG
HLHGHPGPGPGPTAGPGSHFNGLNQTVLNRADVLAKDPKMLRSQSQLDLCKDSPYELKKG
MSDI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccgcagggctacttgtaccagccgtccgcctcgctggcgctctactcgtgc
cccgcatacagcaccagcgtcatttcggggccccgcacggatgagctcggccgctcttct
tcgggctccgcattctcgccctacgctggctccactgccttcacggctccctcgccgggc
tacaactcgcacctccagtacggtgccgatcccgcggctgcggccgccgccgccttctcg
tacgtgggctctccctatgaccacactcccggtatggcgggttccttgggatatcaccct
tacgccgcacctctgggctcctatccttatggggatcccgcgtaccggaagaacgccact
cgggacgccactgccactctcaaggcctggctcaatgagcaccgaaagaacccgtatccc
actaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtgtcc
acctggttcgtcaacgcgcgccggcgcctcaagaaagagaacaagatgacgtggacgcca
cggaaccgcagcgaggacgaggaggaggaggagaacattgatctggaaaagaacgacgag
gacgagccacagaagcccgaggacaagggcgacctcgagggccccgaagcaggaggaaca
gagcagaaggcggctgcgggctgcgaacggctgcaggggccgctcagccccgccggcaag
gaaactgaaggcagcctcagcgactcggattttaaagagtcgccctccgaaggccgccac
gatgacctgcccaggcccccgcgtgcaggcgagccctccccggctgggcccgcaactgcg
cgtctggcggaggatgcgggtcctcactaccctgcgggtgcgccggcgcccggcccgcac
ccatcagccggagagttgccccccggctcgggcggatcctcggtcatccactcaccaccg
ccacctccgccaccgcctccggccgtgctagccaagcccaaactgtggtctctggcagag
atagccacatcctcggacaaggtcaaggacgggggcggagggagcgagggctctccgtgc
ccaccgtgccccgggcccataggcgggcaaacccttggaggcagccgcgcttctcctgct
ccggcgcccgcacgctcaccctcggcgcagtgtccctttcctggcgggaccgtgctgtcc
cggcctctctactacacggcgcccttctatccgggctacacgaactatggctccttcgga
catcttcacggccacccagggccagggccaggccctacagcgggtcctggctctcatttc
aatggattaaaccagacggtgttgaatcgtgcggacgttttggctaaagacccgaaaatg
ttgcggagtcagtctcagctagacctgtgcaaagactccccctatgaattgaagaaaggt
atgtccgacatttaa
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