Rattus norvegicus (rat): 498934
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Entry
498934 CDS
T01003
Symbol
Lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03018
RNA degradation
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
498934 (Lsm6)
09123 Folding, sorting and degradation
03018 RNA degradation
498934 (Lsm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
498934 (Lsm6)
03041 Spliceosome [BR:
rno03041
]
498934 (Lsm6)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
498934 (Lsm6)
mRNA degradation factors
5'-3' decay
Lsm complex
498934 (Lsm6)
Spliceosome [BR:
rno03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
498934 (Lsm6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
498934
NCBI-ProteinID:
NP_001119557
RGD:
1561937
UniProt:
D3ZG07
LinkDB
All DBs
Position
19:46002592..46017152
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcggaagcaaacccctagtgacttcttaaagcagatcatcgggcgcccagtt
gtggtgaaattaaactctggcgtggattaccgaggggtcctggcctgcctggatggctac
atgaatatagcattggaacagacagaggagtatgtaaacggacagctgaagaataagtat
ggagacgcattcatccgcggaaacaatgtgctgtacataagtacacagaagaggcggatg
tga
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