Rattus norvegicus (rat): 499016
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Entry
499016 CDS
T01003
Symbol
Tulp4
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
499016 (Tulp4)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Other domain-containing proteins
Tubby family proteins
499016 (Tulp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
SOCS_box
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
Beta-prop_HPS5
WDR55
Beta-prop_ELP1_1st
EIF3I
Beta-prop_EML
DUF3527
Motif
Other DBs
NCBI-GeneID:
499016
NCBI-ProteinID:
NP_001102607
RGD:
1564487
Ensembl:
ENSRNOG00000018012
UniProt:
D3ZFM2
A6KP05
LinkDB
All DBs
Position
1:49082492..49218262
Genome browser
AA seq
1546 aa
AA seq
DB search
MYAAVEHGPLLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGILSMSWNYPIFLVEDSSESDTDSDDYSPP
QDGPAAYPIPVQNIKPLLTVSFTSGDISLMNNYDDLSPTVIRSGLKEVVAQWCTQGDLLA
VAGMEQQAQLSELPNGPLLKSAMVKFYNVRGEHIFTLDTLVQRPIISICWGHRDSRLLMA
SGPALYVVRVEHRVSSLQLLCQQAIASTLREDKDVNKLTLPPRLCSYLSTAFIPTIKPPI
PDPNNMRDFVSYPSAGNERLHCTMKRTEDDPEVGGPCYTLYLEYLGGLVPILKGRRISKL
RPEFVIMDPRTDSKSDEIYGNNLISTVIDSCNCSDSSDIELSDDWAAKKSPKISRASKSP
KLPRISIEARKSPKLPRAAQEISRSPRLPMRKPSMGSPSLTRREFPFEDITQHNYLAQVT
SNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFNP
NVFSEDEDDLPVTGASGVPENNPPCTVNIPIAPIHSSAQALSPTQSIGLVQSLLANQNVQ
LDVLTNQTTAVGSVEHAGDAATQYPVSSRYSNPGQVIFGGVEMGRIIQNPPQLPLPPPPP
PPPQGPIQLSAVDHGARDHEHLQKSAKALRPVPQLAEGDAVVFSAPQEVQVAKMNPPPPY
PGTIPAAPTTAAPPPPLPPPQPPVDVCLKKGDFSLYPTAAHYQPPLGYERITTFDSSGNV
EEVCRPRTRMLCSQNTYTLPGPGSSATLRLTATEKKVPQPCTSATLNRLTVPRYSIPTGD
PPPYPEIASQLAQGRNATQRLDNSLIHATLRRNNREVALKMAQLADSSRAPLQPPAKPKG
GTGGAVAQLPARPPPALYTCSQCSGAGPSSQSGAALAHAISTSPLASQSSYNLLSPPDTS
RDRTDYVNSAFTEDEALSQHCQLEKPLRHPPLPEATVTMKRPPPYQWDPVLGEDVWVPQE
RTAQPTVPNPLKLSPLMIGQGQHLDVARVPFVSPKSPSSPTATFQTGYGMGVPYPGSYNT
PSLPGVQAPCSPKDALSPAQFAQQESAVVLQPAYPPSLSYCTLPPTYPGSSTCSSLQLPP
IALHPWNSYSTCPPMQNTQGTLPSKPHLVVEKPLVSPPPAELQSHMGTEVMVETADNFQE
VLSLTESPVPQRTEKFGKKNRKRLDSRAEEGSVQAITEGKVRKDARTLSDFNSLIASPRL
GREKKKVKSQKDQLKSKKLNKTNEFQDSSESEPELFISGDELMNQSQGSKKGWKSKRSLR
TASELEEFKGRKASEKEDGRLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNF
QIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcagcagtggagcatggacctctgctttgcagcgattccaacatcctctgcctg
tcctggaaagggcgtgtccccaagagtgagaaggagaagcctgtgtgcagaaggcgctac
tatgaagaaggatggttggccacaggcaatgggcgaggtgtggtgggggtgaccttcacc
tcgagtcactgtcgcagagataggagtacgccacaaagaattaacttcaacctacgaggc
cacaacagtgaggttgtgctggtgaggtggaatgaaccgtaccagaaactggccacgtgt
gatgcagatggaggcatctttgtgtggatccagtatgaaggcaggtggtctgtggaactg
gtcaatgaccgtggcgctcaggtgagtgatttcacatggagccacgatgggactcaagct
cttatttcatatcgcgatgggtttgtcctggttggttctgtcagtggacaaagacactgg
tcatctgaaatcaatttggagagccagatcacatgtgggatatggactcccgatgaccag
caggtattgtttggcacagccgatgggcaggtgatcgtcatggactgccatggcagaatg
ctagcccatgtcctcctgcatgaatctgatggcatcctcagcatgtcctggaattacccc
atcttcctggtggaggacagcagcgagagcgacacagactcagacgattattctcctccc
caagatgggcctgcagcataccccatccctgtgcagaacatcaagcctctgctcaccgtc
agcttcacctcgggagacatcagcttaatgaacaactatgatgacttgtctcccactgtc
atccgctcaggactgaaagaggtggtggcccagtggtgtacgcagggcgacttactggca
gtggctgggatggagcagcaggcccagctcagcgagctgcccaatgggcctctgctgaag
agtgccatggtcaagttctacaatgtcagaggggagcacattttcactctggacacactc
gtgcagcgccccatcatctccatctgttggggccatcgggactcccggctgcttatggcc
tcaggaccagccctgtatgtggttcgtgtagaacaccgagtgtccagtctgcagctgctg
tgccagcaggccatcgccagcacccttcgagaagacaaggatgttaacaagctgaccttg
ccccctcgtctctgttcctacctctccactgccttcatccccactattaagcccccaatt
ccagaccccaacaacatgcgagactttgtcagctacccatcagcaggcaatgaacgacta
cactgcaccatgaagcgtacagaggatgacccggaggtcggggggccctgctacacactc
tacctggagtatctgggaggacttgtacccattctcaaagggaggcgcatcagcaaactg
cggccagaatttgtcatcatggaccctcggacagacagcaaatcagatgagatctatggg
aacaacttgatttctactgtgattgacagctgcaactgttcagactccagtgatattgaa
ctgagtgatgattgggctgccaagaagtctcccaaaatttccagagctagtaaatcgccc
aaactgccaaggatcagcattgaggcacgaaagtcacccaagctgcctcgggctgctcaa
gagatttctcggtctccccgattgcccatgcgcaagccctccatgggctcacccagcctg
acccggagagagtttccttttgaagacatcactcagcacaactatcttgctcaggtcaca
tccaatatctgggggaccaagtttaagattgtgggcttggctgcattcctaccaaccaac
ctcggtgcagtaatctacaaaaccagcctgctgcatctccagcctcggcagatgaccatt
tatctcccagaagttaggaagatttccatggactatattaatctgcctgtcttcaaccca
aacgttttcagtgaggatgaagatgacttaccagttacgggagcatcaggcgtccctgaa
aacaacccaccttgtacggtaaacatccctattgcaccaatccacagctctgctcaagct
ctgtctcccacacagagcatagggctggtgcagtccctgctggccaatcagaatgtgcag
ttggatgtcctgaccaatcagacaacagctgtagggtccgtagagcatgcaggtgatgct
gctacccagtacccagtctccagccggtactccaaccctggacaggtgatttttggaggt
gtagaaatgggccgaatcattcagaaccctcctcaactgcctttgccaccaccgccacca
ccaccaccacaggggcccattcagctgtctgcagtggaccatggagctcgggaccatgag
cacctgcagaagtcagccaaggccctgcggccagtgcctcagctggctgagggggatgca
gtggttttcagtgcccctcaggaggtccaggtggcaaagatgaatcccccacccccatac
ccaggaactatccctgctgcccccaccacagctgcacccccaccccctctgccaccacca
cagcccccagtggatgtgtgtttgaagaagggtgacttctcactgtaccctacagcagca
cattaccagcctccactaggctatgagaggataaccacctttgacagcagtggcaatgtg
gaagaggtgtgccggcctcgcactcggatgctctgttcccagaacacctacactcttcct
ggcccaggcagttctgccaccttgagactcacagccactgagaagaaggtcccccaaccc
tgtaccagtgccactctgaaccgactaactgtccctcgatattccatccccacaggggac
ccacctccataccctgaaatcgctagccagctggcccaggggcggaatgctactcaaagg
ctggataacagtctcatccatgccaccctacgaaggaacaaccgagaggttgcacttaag
atggcccagctggctgacagctcccgtgccccactgcagcccccagccaagcctaagggg
ggcactggtggggcagtggcacagctcccagcaaggcctccacctgccctatacacctgc
agccagtgcagtggagcagggcccagctcacagtcaggtgcagccctggcccatgctatc
agcacctccccgctggcctcccagtcctcctacaatcttctaagccctcctgacacctcc
cgtgatcgtactgactatgtcaactcagccttcacagaggacgaggccctgtctcagcac
tgtcagcttgagaaacctctgcggcatcccccacttcctgaagccactgtcaccatgaag
cggcctcccccctaccagtgggaccccgtgctgggtgaggacgtttgggttccccaggaa
aggacagcacagcctacagtgcccaaccccttaaaactgtcccctctcatgatagggcag
ggccagcacctggatgtggctcgagtgccctttgtgtctcccaagtctccatccagccct
actgccaccttccagacaggctatgggatgggagtgccatatccaggcagctataatacc
ccctctttgcctggagtccaagctccgtgttcccctaaggatgccctgtccccggcacag
tttgcacaacaggagtctgctgtcgtacttcagccagcatacccacccagcctttcctat
tgcaccttgccccccacatacccaggaagcagcacatgctccagtttacagctgccgccc
atcgccttgcacccctggaattcctacagcacctgcccgcccatgcagaatacccagggc
actctcccctccaagccccacttagtggtggagaagcctctcgtgtcccctccacctgcc
gagctccaaagccacatgggcacagaggtgatggtagagactgcagacaatttccaagaa
gtcctctctctgacagaaagccccgtgccccagagaacagagaaatttggaaagaagaac
cggaagcgccttgatagccgagcagaggaagggagtgttcaggccatcactgagggcaaa
gtaagaaaggatgctaggactttgagcgactttaactcgctcatcgccagtccccgcctg
gggagagagaagaagaaagtgaaaagtcagaaagaccaactgaagtcaaagaagttgaac
aagacaaacgagttccaggacagctcagagagtgagcccgagctgttcatcagcggggat
gagctgatgaaccagagccagggcagcaagaaggggtggaaaagcaagaggagcctgcgg
acggccagcgagctggaggaattcaagggccgcaaagccagtgagaaggaagacgggcga
ctgggcagccagggcttcgtgtatgtgatggccaacaagcagcctctgtggaatgaagcc
acccaggtgtaccagctagactttggagggagggtgacccaggagtctgccaagaacttc
cagatcgagttggagggacggcaggtgatgcagtttggacggatcgatggtaatgcttac
atcctagacttccagtaccccttctcagctgtgcaggcttttgctgttgccctggccaat
gtgactcagcgcctaaaatga
DBGET
integrated database retrieval system