Rattus norvegicus (rat): 499505
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Entry
499505 CDS
T01003
Symbol
Msh3
Name
(RefSeq) DNA mismatch repair protein Msh3
KO
K08736
DNA mismatch repair protein MSH3
Organism
rno
Rattus norvegicus (rat)
Pathway
rno01524
Platinum drug resistance
rno03430
Mismatch repair
rno05200
Pathways in cancer
rno05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
499505 (Msh3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
499505 (Msh3)
09162 Cancer: specific types
05210 Colorectal cancer
499505 (Msh3)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
499505 (Msh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rno03400
]
499505 (Msh3)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
499505 (Msh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
499505
NCBI-ProteinID:
NP_001178886
RGD:
1563954
LinkDB
All DBs
Position
2:complement(25179400..25320857)
Genome browser
AA seq
1105 aa
AA seq
DB search
MPRRKSASGGSNAAGPDPGRQVVLSRFFKSAGSLRSSVSPTEPAEKVTEGDSRKRSLGNG
EPTNKKAKKVPEEEGENTSVASHNPEPKKCLRPRIVSKSLEKLKEFCCDSALPQNRVQTE
ALWERLAVLPKCTDFEDITLQRAKNAVLSEDSKSQANQKDTQFGPSPEAFQKTSTCKPFN
RRSKSIYTPLELQYLDVKQLHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMT
ASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTLIGE
DVNPLIRLDDSVNIDEAVTDTSTNYLLCIYEEKENIKDKKKGNISFGIVGVQPATGEVVF
DCFQDSASRLELETRTASLQPVELLLPSQLSEPTEMLIRRATAVSVGDDRIRVERMNNTH
FEYSHAFQTVMEFYARETVDTQGSQSLSGVIHLEKPVICALAAIIRYLKEFNLDKVLSKP
ENFKQLSSGMEFMRINGTTLRNLEILQNQTDMKTRGSLLWVLDHTKTSFGRRKLKKWVTQ
PLLKLRDINARLDAISDVLHSESSVFEQIENLLRKLPDVERGLCSIYHKKCSTQEFFLIV
KNLCQLKSELQALMPAVNSHVQSDLLRARVLEVPELLSPVEPYLKVLNEQAAKAGDKTEL
FKDLSDFPLIKKRKNEIQEVIHSIQMHLQELRKILKLPSLQYVTVSGQEFMVEIKNSAVS
CVPTDWVKVGSTKAVSRFHSPFVVENYRRLNQLREQLVLDCNAEWLDFLENFGEHYHTLC
KAVDHLATVDCIFSLAKVAKQGSYCRPTLQEEKKIIIKNGRHPMIDVLLGEQDQFVPNST
NLSQDSERVMIITGPNMGGKSSYIKQVALVVIMAQIGSYVPAEEATIGIVDGIFTRRGAA
DNIYKGRSTFMEELTDTAEIIQKATQRSLVILDELGRGTSTHDGIAIAYATLEYFIRDVK
SLTLFVTHYPPVCELEKRYPEQVGNYHMGFLVNEDGSKQDSGDMEQMPDSVTFLYQITRG
IAARSYGLNVAKLADVPREILQKAAHKSKELEGLVNLRRKRLEYFIDLWTTHSVKDLHTR
AAELEIQEIQTSPHNEMKTTLLELK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcaggaaatccgcgtcgggaggctctaatgccgccggcccagacccggggagg
caagtggttctgagccggttcttcaagtctgcgggaagcctaagatccagcgtgtccccc
acagaaccagcagagaaggtgacagaaggtgacagcaggaagaggtcactggggaatggt
gagcccactaacaagaaagcaaagaaagttccagaggaggaaggagaaaatacctcagta
gcatctcacaatcctgagccaaagaaatgtctgaggcccaggattgtttcaaagtccctg
gaaaagttgaaagaattctgctgtgattctgccctccctcaaaacagagtccagacagaa
gccctttgggagagacttgcagttctgccaaagtgtactgatttcgaagatatcactctg
caacgtgcaaagaatgcggttttgtccgaagattccaagtctcaggctaatcagaaagac
actcaatttggaccttcccctgaagctttccagaagacttccacttgtaaaccttttaac
aggcggtccaagagcatctatactccactagaactgcagtaccttgatgtgaagcagctg
cataaagacgcggttttgtgtgtggaatgtgggtacaagtacaggttctttggggaagat
gcagaaattgctgcccgggaactcaatatttattgccacttggaccacaactttatgacg
gcgagcatacccacccacagactgttcgtgcatgtccgccgactggtggccaaaggatac
aaggtgggagttgtgaagcaaactgaaactgcggcattaaaggccattggagacaataaa
agttctgtcttttcccggaaattgactgctctttatacgaaatccacactgattggagaa
gatgtgaatcctctgatcaggctggatgattctgtaaatattgatgaggcagtgacggat
acttctaccaactatcttctgtgtatctacgaagaaaaggaaaacattaaagacaaaaag
aaggggaacatttcttttggcatcgtgggagtgcagcctgcgacgggcgaggtcgtgttc
gactgcttccaggactcggcttccagactggagctggagactcgaacagcaagcctgcag
cccgtggagctgctgctcccctcacagctgtccgagccaacggagatgctcatccgtaga
gccaccgctgtcagtgttggggatgacagaattcgagtagaaaggatgaataatactcac
tttgaatacagccatgctttccagacagttatggagttctatgccagagagacagttgac
acccagggctctcagagcctgtctggtgtcattcacttggagaagcctgtgatctgcgcc
ctggctgccataatacggtacctcaaggaatttaacttggacaaggtgctgtccaaaccc
gagaattttaaacagctgtcaagtggaatggaattcatgagaatcaatggaacaacgcta
aggaatctggaaatcctacagaatcagactgatatgaagaccagaggaagtttgctttgg
gttttagaccacactaaaacctcatttgggagaaggaagttaaaaaaatgggttacccaa
ccattgcttaaattaagggacataaatgcccgacttgatgcaatatccgatgttctccac
tcagaatccagtgtgtttgaacagatagaaaaccttctacggaaactaccggatgtcgag
agaggactgtgtagcatttatcacaagaagtgctctactcaggagttcttcttgatcgtc
aaaaacctgtgtcaactcaaatcagagcttcaagcgttaatgcctgctgttaattcccac
gtacagtcagacttgctccgagcacgcgtcttagaagtgcctgagctcctcagtccagtg
gagccttatttaaaggttctgaatgaacaagctgccaaagctggcgataaaactgaatta
ttcaaagacctctctgacttccctttaataaaaaagaggaaaaatgaaattcaagaagtc
attcacagcatccaaatgcatttacaagaattgcgaaaaatattaaaacttccttcttta
caatatgtgactgtatcaggacaagagtttatggttgaaataaagaactcagctgtgtct
tgcgtcccgactgactgggtgaaggttggaagcacaaaagctgtgagccgctttcactct
ccttttgtcgtggaaaactacagacgtctgaatcaactccgggagcagctagtccttgac
tgcaatgctgaatggcttgactttctagagaattttggtgaacattaccacactttgtgt
aaggccgtggatcacctagcaactgtggactgcattttctccctggccaaggtcgccaag
caaggaagttactgcaggccaactctacaagaagaaaagaaaatcatcataaaaaatgga
aggcaccctatgattgatgtgttgctgggtgaacaagatcagtttgtgcccaacagtaca
aatttatcacaggactctgagagagtaatgataatcaccggaccgaacatgggtggcaag
agctcctacataaaacaggttgctctggttgtgatcatggctcagatcggctcctacgtt
cctgcagaggaagccacaattgggattgtggacggcattttcacaaggaggggtgctgca
gacaatatatacaaaggccggagtactttcatggaagagctgacagacacggcggagata
atccagaaagcaacacagcggtccctggttatcctggacgagctgggaagagggaccagc
acccacgacggaatcgccattgcctatgcgactctagagtattttatcagagacgtgaaa
tccttaaccctgttcgtcacccactatccaccagtctgtgaactagagaaacgttaccca
gagcaggtggggaattaccacatgggcttcttggtcaatgaggacggaagcaagcaggac
tcaggtgacatggagcagatgccggactctgtcactttcctctatcagataaccagagga
attgcagcgaggagttacggactgaatgtggcgaagctagcagatgtgcccagagaaatc
ttacagaaagctgctcacaagtctaaagagctggaaggcttagtcaatctgagaaggaaa
agacttgaatattttatagatctgtggacgacacatagtgtaaaggacctgcacacgcgg
gcagctgagctggaaatacaggaaatacagacgtctccccacaatgaaatgaaaactaca
cttttggagctgaagtag
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