Rattus norvegicus (rat): 499697
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Entry
499697 CDS
T01003
Symbol
Trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rno03016
]
499697 (Trmt13)
Enzymes [BR:
rno01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
499697 (Trmt13)
Transfer RNA biogenesis [BR:
rno03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
499697 (Trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
499697
NCBI-ProteinID:
NP_001029074
RGD:
1565211
Ensembl:
ENSRNOG00000015140
UniProt:
B2GV29
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All DBs
Position
2:complement(207217399..207232467)
Genome browser
AA seq
495 aa
AA seq
DB search
MEAPAPTTPAIGFPTDGRCNYFVEKKKRFCRMVVAAGKRFCGEHAGSAEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEILEQLVPLSSLSEEQLE
TLIKKLRKASEGLNSTHEDHIMSHPALHDALNDPRNGDCAVKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAENVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNRLPVLREGRLPVVGIGKHLCGVATDLALRCLVETYAASFKEKDEEPLAKRVK
NDKTEKESNTLAKEGSEKDVPETRTPVAGIVIALCCHHRCDWRHYVGKEYFKALGLGAVE
FYYFQRMSSWATCGMRTSLEASDVTAERKDAQKDEEEEHDDVGDRLTDGSTDSLPGTLTV
EEKKKIGHLCKLLIDQGRLQYLQQKGFSPALQYYTDPLVSLENVLLTAVPAHLSSQEKNQ
SVKGNMNMMSSTSKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcctgctccgacaacgcccgcgatcggttttccaactgacggtagatgcaac
tactttgtggaaaagaagaagcgcttctgcaggatggtggtggccgcggggaaaaggttc
tgtggtgaacacgctggatcggcggaggaagaaaatgctcggaaaagaatcttatgtcct
ttagatccaaaacacacagtatatgaagaccaactagcaaaacatttgaaaaaatgtaat
tcaagagagaagcctaagcctgatttctttattcaagatataaatgcaggattaaaggat
gaaacagaaattcttgaacaattagttccactttcttctctatctgaggagcagttggaa
accttaattaagaaattgagaaaagcaagtgaaggcttgaactctacacatgaagatcac
attatgtcccatccagcattacacgacgcccttaatgacccgagaaatggtgattgtgca
gtcaagcacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcaggaaaggggaaattatctcactgggtt
gatattgccttaaaagatgctgaaaacgttcacttcatcctggtagaaaaagtgaccaca
agattcaaggtagatggtaaacacagaaaaaagaactcagtgtttgaaagacttcaaatt
gatatccaacacttgtgcttgaacaggcttcctgtgctaagagaaggaagactgcctgta
gtaggaattgggaagcacctgtgtggggtggcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttttaaggaaaaggatgaagaacctttagccaaacgcgtaaag
aatgataaaacagaaaaagaaagtaacactttggccaaggaaggaagtgaaaaagatgtc
ccagagacacggacccctgtggctggcattgtcattgcgctctgttgtcaccacaggtgt
gactggagacattatgtgggcaaagagtatttcaaggctcttgggcttggcgcagtggag
ttctactatttccagagaatgagtagttgggcaacgtgtgggatgaggacgtctttggaa
gcctcagatgttactgcagagagaaaagatgctcagaaggatgaggaggaagagcacgat
gatgtaggagacagactcacggatggcagcactgacagtttgcctgggactcttactgtt
gaagaaaagaagaaaataggacatctttgcaaattgctgattgaccaaggccgactccag
tatttacagcagaaaggcttcagtcctgccttacagtactatacggacccattggtgtct
ctggaaaatgtattattaactgctgtaccggctcatctgtcatcgcaggaaaaaaatcaa
tcagtgaaaggaaacatgaacatgatgtcttccacaagcaaaaaataa
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