Rattus norvegicus (rat): 500086
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Entry
500086 CDS
T01003
Symbol
Ift56
Name
(RefSeq) intraflagellar transport protein 56
KO
K19685
intraflagellar transport protein 56
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
500086 (Ift56)
Cilium and associated proteins [BR:
rno03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
500086 (Ift56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_14
TPR_16
TPR_2
TPR_17
TPR_9
TPR_1
TPR_8
TPR_12
TPR_11
TPR_6
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
500086
NCBI-ProteinID:
NP_001020216
RGD:
1561363
Ensembl:
ENSRNOG00000027617
UniProt:
Q5U2N8
LinkDB
All DBs
Position
4:68057530..68115494
Genome browser
AA seq
554 aa
AA seq
DB search
MMLSRAKPAVGGESPHTDKRKKKGRKIPKLEDLLSQRDFTGAITLLEFKRHVGEQEEDTN
LWIGYCAFHLGDYKRALEEYENAAKEENCNPEVWVNLACTYFFLGMYKQAEAAGFKAPKS
RLQNRLLFHLAHKFNDEKKLMNFHQNLQDIKEDQLSLASIHYMRSHYQEAIDIYKRILLD
NREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHFRLYNGKAAEA
ELKSLMDNASSPFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDD
VQEAYNLIKDLEPTTPQEYILKGVVNAALGQEMGSRDHMKIAQQFFQLVGGSASECDTIP
GRQCMASCFFLLKQFDDVLIYLNSFKSYFYNDDIFNFNYAQAKAATGNTSEGEEVFLLIQ
SEKLKNDYIYLSWLARCYIMNKKPRLAWELYLKMETSGESFSLLQLIANDCYKMGQFYYS
AKAFDVLERLDPNPEYWEGKRGACVGIFQMILAGREPKETLREVLHLLRSTGNTQVEYII
RIMKKWAKENRVPI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatgctttcaagggccaaacccgctgtgggtggggagtcaccacacactgacaaaaga
aagaagaaagggaggaagattccaaaactagaggatctactttcgcaaagagatttcact
ggcgctattaccctattggagttcaaacgccatgttggggagcaagaagaggacactaac
ttatggattggctactgtgcttttcacctgggtgactacaagagagctttggaggaatac
gaaaacgcggcgaaggaggagaattgcaacccggaagtgtgggtaaacttggcctgcacc
tactttttccttggaatgtataaacaagcagaagctgctgggtttaaagctccaaaaagc
cgactccaaaaccgcctactattccatctggctcacaagtttaatgatgagaagaaatta
atgaactttcatcagaatcttcaggatatcaaagaagaccagcttagcttggcctcaatc
cactacatgcgatctcattaccaagaagctattgatatatacaagcggatactgctggat
aacagggaatacctggccctcaatgtgtatgtggccctctgctactacaaattggattac
tatgatgtgtctcaagaagtcctggctgtttaccttcagcaaattcctgatagcaccatc
gccctcaaccttaaggcctgcaatcactttcgcctttataatggcaaagcagctgaggca
gagctcaaaagcttgatggacaatgcctcttcaccatttgaatttgctaaagaactcatc
agacacaatctggttgttttccgaggaggagaaggggctttgcaggttttacctccccta
gttgatgtcattcctgaagctaggctaaacctagtgatttactaccttcgtcaagatgat
gtgcaggaagcctataatttgatcaaggacctggaacctactacacctcaggagtatatt
ctcaagggagttgtcaatgcagcccttggccaggaaatgggttcaagggatcatatgaaa
attgcccaacagtttttccagttggtaggaggatcagctagtgaatgtgatacaatacca
ggaaggcagtgcatggcttcctgtttcttcctgcttaaacaatttgatgatgtcttgatt
tacctcaactcttttaagagttacttctacaacgacgacatctttaactttaattatgcc
caagccaaagctgcaacaggcaacaccagtgagggtgaggaggttttcctcttgatccaa
agtgagaaattgaaaaatgattacatttaccttagttggttagctcgctgctatattatg
aacaagaaaccaagactagcttgggaactttatctcaagatggaaacctccggcgagtcc
ttcagcctcttacagctcattgccaatgactgttacaagatgggccagttctactattca
gccaaggcttttgatgtcctagagaggctggatcccaaccctgaatactgggaaggcaag
aggggtgcctgtgtgggaattttccagatgattttagctgggagagaacccaaagagacc
ctccgagaagtgctgcatttgctgagaagcacaggaaacacccaagtggagtatatcatc
aggatcatgaagaagtgggccaaggagaatagagtgcccatctaa
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