Rattus norvegicus (rat): 500116
Help
Entry
500116 CDS
T01003
Symbol
Tra2a
Name
(RefSeq) transformer-2 protein homolog alpha
KO
K12897
transformer-2 protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03040
Spliceosome
rno04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
500116 (Tra2a)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
500116 (Tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rno01009
]
500116 (Tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
500116 (Tra2a)
Protein phosphatases and associated proteins [BR:
rno01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
500116 (Tra2a)
Spliceosome [BR:
rno03041
]
Common components
Common spliceosomal components
SR proteins
500116 (Tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
500116
NCBI-ProteinID:
NP_001119768
RGD:
1562563
Ensembl:
ENSRNOG00000009156
UniProt:
B1WC25
LinkDB
All DBs
Position
4:complement(79551699..79570621)
Genome browser
AA seq
282 aa
AA seq
DB search
MSDVEENNFEGRESRSQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRS
RRHSHRRYTRSRSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANPDPNTCLG
VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANG
MELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGGGRRRDSYYDR
GYDRGYDRYEDYDYRYRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtagaggagaacaacttcgagggcagagagtctcgctctcagtcaaaatct
ccaacgggaactcctgctcgtgtaaaatcagagagcaggtcaggatctcgtagtccatca
agggtttccaaacattctgaatcccattctcgatcaagatcaaaatccaggtcgaggtca
cggaggcattctcatagacgctacacgcgatccaggtcacactctcacagaagacggtcg
cgaagtaggtcctatacaccagagtacaggcggaggaggagccggagccactcccccatg
tcaaaccgcagaaggcacactggcagcagggcaaacccagatcctaacacttgcctggga
gtatttggcctcagtctgtatacaacagagagagatcttcgtgaagttttttctcgatat
ggacctctgagtggtgttaatgtggtttatgatcagcgaactgggaggtcacgcgggttt
gcttttgtgtattttgagaggatagatgactctaaggaggctatggaaagagcaaatggg
atggagctggatggtagaagaattcgtgtggattattctatcaccaagagagcacacaca
cctacaccaggcatttacatgggcagaccaactcacagtggtggtggaggtggcggagga
ggaggtggtggcggcggtggtggtggaggtggtagacggcgagattcttactacgataga
ggatatgatcgaggctatgacagatatgaagattatgattaccggtacagaagaaggtcg
ccttctccttactacagtcgctacaggtcacgatcaagatcccgttcctatagcccaaga
cgctattga
DBGET
integrated database retrieval system