Rattus norvegicus (rat): 500133
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Entry
500133 CDS
T01003
Symbol
Nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04621
NOD-like receptor signaling pathway
rno05132
Salmonella infection
rno05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
500133 (Nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
500133 (Nod1)
05133 Pertussis
500133 (Nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rno04054
]
500133 (Nod1)
Pattern recognition receptors [BR:
rno04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
500133 (Nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
LRR_4
WHD_NOD2
AAA_16
RsgA_GTPase
AAA_22
Sigma54_CBD
ABC_tran
PIF1
AAA_25
Motif
Other DBs
NCBI-GeneID:
500133
NCBI-ProteinID:
NP_001102706
RGD:
1562269
Ensembl:
ENSRNOG00000010629
UniProt:
A6K0W2
D4ADT7
LinkDB
All DBs
Position
4:complement(85391142..85442281)
Genome browser
AA seq
953 aa
AA seq
DB search
MEKRGQHEMEGVPAGCHSHIKLLRINREHLVTNIRNTQCLVDNLLENGYFSAEDAEIVCA
CPTQPDKVRKILDLVQSKGEEVSEFFLYVLQQLEDAYVDLRLWLSEIGFSPSQLIRTKTI
VNTDPVSRYTQQLRHQLGRDSKFMLCYAQKEDLLLEETYMDTLMELVGFNNENLGSLGGL
DCLLDHSTGVLNEHGETVFVFGDAGVGKSMLLQRLQSLWASGRLASKAKFFFHFRCRMFS
CFKESDTLTLQDLLFKHFCYPEQDPEEVFSFLLRFPHTALFTFDGLDELHSDFDMSRVPD
SCCPWEPAHPLVLLANLLSGRLLKGAGKLLTARTGVEVPRQLLRKKVLLRGFSPSHLRAY
ARRMFPERTAQEHLLQQLDANPNLCSLCGVPLFCWIIFRCFQHFHTAFEGSSQLPDCAVT
LTDVFLLVTEVHLNRTQPISLMQRNTRSPAETLRAGWRTLQALGEVAHRGTDRSLFVFGQ
EEVQASKLQEGDLQLGFLRALPDVGPEQSQQSYEFFHLTLQAFFTAFFLVADDKVSTQEL
LRFFREWTSPGEATSRSCYPSFFSFQCLGSGSRLGPDPFKNKDHFQFTNLFLCGLLAKAR
QKLLQQLVPKAILRKKRKALWAHLFASLRSYLKSLPRVQSDGFNQVHAMPTFLWMLRCIY
ETQSQKVGRLAARGISADYLKLAFCNACSADCSALSFVLHHFHRQLALDLDNNNLNDYGV
RELQPCFSRLTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQIL
DECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHP
SLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVNQTLKH
LWLIQNHITAEGTAQLARALQKNTTITEICLNGNLIKPEEAKVFENEKRIICF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcgcggccaacatgagatggaaggcgtcccagccggttgtcactcccacatt
aaactgttgaggatcaacagggaacacctggtcaccaacattcggaacactcagtgcctg
gtggacaacttgctggagaacggttacttctcagccgaggatgcagagatcgtgtgtgct
tgtcctacccagcctgacaaggtccgaaagatccttgacctggtgcagagcaaaggtgag
gaggtgtctgagttcttcctctacgtgctacagcagctggaggatgcttacgtggacctc
aggctgtggctatcagagattggcttctccccttcccagctcatccggaccaaaactatc
gtcaatactgacccagtaagcaggtatacccagcagctgcgacaccaactgggccgcgat
tccaagttcatgctgtgctacgctcagaaggaggacctgctgctggaggagacctatatg
gacacactcatggagctggtaggcttcaacaatgaaaacctgggcagcctaggaggcctg
gattgcctgctggaccacagcacaggtgtcctcaacgagcatggcgagactgtcttcgtg
ttcggggacgcgggagttggcaagtccatgttgctacagaggttgcagagcctctgggcg
tctggcaggctggcctcaaaagccaaattcttcttccactttcgctgccgtatgttcagc
tgcttcaaggagagcgacacattgactctgcaagacctgctcttcaagcatttctgctac
ccggagcaggaccccgaggaggtgttctccttcttgctgcgctttccccacacagcgctc
ttcacttttgacggcctggatgagctgcactcagacttcgacatgagccgcgtgccggac
agctgctgcccctgggagccggcgcaccctctggtcctgctagctaacctcctaagcggg
aggttgctcaagggtgcgggcaaactgctcactgctcgcacaggcgtggaggtcccccgc
cagctcctgcgcaaaaaggtgctgctccggggtttttcccccagccacctgagagcctat
gcccgccggatgttccccgagcgcaccgcgcaggaacatctgctgcagcagctggatgcc
aaccccaacctctgcagcctgtgcggggtgccgctcttctgctggatcatcttccgatgt
ttccagcatttccacacggccttcgagggctcctcgcagctgccggactgcgctgtgacc
ctgaccgatgtctttctgctggtcaccgaggtgcatctgaacaggacgcagcccatcagc
ctgatgcagcgaaacacgcgcagcccggcggaaaccctacgtgcaggctggcgcacgctg
caggcgctgggagaggtggctcaccgaggcacggacaggagtctctttgtgtttggccag
gaggaggtgcaggcgtcgaaactgcaggaaggggatctgcagctgggtttcctgcgggct
ttgcccgatgtgggccctgaacaaagtcagcagtcttatgaatttttccaccttacgctc
caggctttcttcactgccttcttcctggtagcagatgacaaagtgagcacccaggaattg
ctaaggttctttcgagaatggacgtctcccggggaggcaacaagcaggtcctgctatcct
tccttcttctccttccagtgcctgggtagcggtagccggttgggccctgatcctttcaag
aacaaagatcacttccagttcaccaacctcttcttgtgcgggctgctggccaaagcccga
cagaaactccttcagcagctggtgcccaaggctatcctaaggaagaagcgcaaggccctg
tgggctcacctgtttgccagcctgcgctcctacttgaagagcctaccccgggtccagtct
gatgggtttaaccaggtacatgccatgcccacattcctgtggatgctgcgctgcatctat
gagacacagagtcagaaggtggggcgcttagccgccaggggcatcagtgcggactacctc
aagctagccttctgcaatgcttgttctgccgactgtagtgccttgtccttcgtcctgcat
cacttccacagacagctggccctagacctggacaacaacaacctcaatgactatggagtt
cgagagctgcagccttgctttagccgtctcacggttatcagactcagtgtcaaccagatc
accgacatgggggtgaaggtgctgtgtgaggaactgaccaagtacaaaatcgtgacattc
ttgggtttatacaacaaccagatcactgatatcggagccaggtatgtggcccaaatcctg
gatgaatgcagaggcctcacgcaccttaaactggggaaaaacagaataacaagtgagggc
ggcaggtgtgtggcccaggctgtgaagaacagcacctccattgttgaggttgggatgtgg
ggcaatcagattggagacgagggagcaaaagccttcgcagaggcgctgagggaccacccc
agcctgaccactcttagtcttgcattcaatggcatctccccggagggagggaagagcctt
gcacaggccctgaagcagaacaccactctgacaataatctggctgaccaaaaatgaactt
aatgatgaggccgcagagtgcttcgccgagatgctgagggtgaaccagacactgaagcat
ttatggctaatccagaatcatatcacagctgaggggacagcccagctggccagggcactg
cagaagaataccaccatcacagagatttgcctcaatggaaacttaattaagcccgaggag
gccaaagtctttgaaaatgagaagcggatcatctgtttctga
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integrated database retrieval system
