Rattus norvegicus (rat): 501088
Help
Entry
501088 CDS
T01003
Symbol
Tbc1d5
Name
(RefSeq) TBC1 domain family member 5
KO
K18469
TBC1 domain family member 5
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
501088 (Tbc1d5)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
501088 (Tbc1d5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Med3
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
501088
NCBI-ProteinID:
NP_001128234
RGD:
1561626
Ensembl:
ENSRNOG00000010637
UniProt:
F1M9Q1
LinkDB
All DBs
Position
9:complement(3740032..4256971)
Genome browser
AA seq
805 aa
AA seq
DB search
MYKSVSETRHPLQSEEQEVGIDPLFSYSNKPRGDSCQNGRGANSNLDCDGTFSSYMREWD
DLFVNNNYLAAVRQKGINGQLRSSRFRSICWKLFLCVLPQDKSQWISRIKELRSWYSNIK
EIHITNPRKVVGQQDLMINNPLSQDEGSLWNKFFQDKELRSMIEQDVRRTFPEMQFFQQE
NVRKILTDVLFCYARENEQLLYKQGMHELLAPIIFTLHCDHQAFLHASESAQPSEEMKTL
LNPEYLEHDAYAMFSQLMETAEPWFSTFEHDGQKGKETLMPPIPFARPQDLGPTVAIVTK
VNQIQDHLLKKHDTELYMHLNRLEIPPQIYGLRWVRLLFGREFPLQDLLVVWDALFADGL
HLSLVDYVFTAMLLYIRDALISSNYQTCLGLLMHYPLIGDIHSLILKALFLRDPKRNPRP
VTYQFHPNLDYYKARGADLMNKSRTNARGAPLNIHKVSNSLINFGRKLIAPASAPGSMGG
PVPGSNSSSSFSAAVPFRTSAEAPRHHSQQQRQQQQQQQQQQQQQQQQQQQRLMKSESMP
VQLNKGQSPKTISSSPSMESLPGGREPPGSPPSSATKRDSFFSHIARSRSHSKAMGRKES
EEELEAQISFLQGQLNDLDAMCKYCAKVMDMHLVNIQDVVLQENLEKEDQILVSLAGLKQ
IKDILKGSLRFNQSQLEAEENEQITIADDHYCSSGQDQGTQGPRAAKQASSEMPGCTGGA
TSDDFILVSKEDEGRRAKEAFSGQAQPLLTLRNTSGKSRVPTCSPLVFSDPLMGPASASS
SNPSSSPDDDSSKDSGFTIVSPLDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtataagtctgtgtctgaaactagacatcctctgcagtcagaagaacaagaagtaggc
attgaccccttgttcagttattcaaacaagccaagaggagattcctgtcaaaatggaaga
ggagcaaattccaacttagactgcgacgggactttcagttcatatatgagagagtgggac
gacctctttgtaaataacaactacttggcagcagtgaggcagaaggggattaatgggcag
ctgagaagcagcaggttccgcagcatttgttggaagctctttctttgtgttcttcctcaa
gataaaagtcaatggatcagtagaattaaagaactaagatcctggtatagcaatattaaa
gaaatacatatcactaatccaaggaaagttgttggccaacaggatctgatgataaacaat
cccctctcacaagatgaaggaagtctttggaataagttctttcaagataaagagctgcgg
tccatgattgagcaagatgtcagaagaacgtttcctgaaatgcagtttttccaacaagaa
aatgtgagaaaaattcttacagatgttctgttctgctatgctagagaaaacgagcagttg
ctttataaacagggcatgcatgagctgctagcgcccatcatcttcacccttcactgtgac
caccaagcttttctacacgccagtgagtctgcacagcccagtgaggaaatgaaaactctc
ttgaaccctgagtatctggagcatgatgcctatgcaatgttctcacagcttatggaaact
gctgaaccttggttttccacttttgagcatgatggtcaaaagggaaaagaaactctgatg
ccccccattccctttgctcgaccacaggatttaggaccaacagttgccattgttacaaaa
gtcaaccagatccaggatcatctactgaagaagcatgatactgagctctacatgcacttg
aacagactagaaattccaccacaaatatatgggttacggtgggtgcggctgctgttcggc
agagagttccctctacaggacctgctggtggtctgggatgccctgtttgcggacggcctc
cacctgagtctagttgactatgtcttcacggccatgctgctctacatccgagacgctctg
atttctagtaactatcagacctgtctcggccttttgatgcattatccactcatcggggac
atacactcactgatactgaaggccctgttccttagagacccaaagagaaaccccaggcca
gtgacttaccagttccaccccaatttagactactacaaagcacggggagctgaccttatg
aacaaaagccggaccaatgccagaggtgctcctctgaatatacacaaggtctccaacagc
ttgattaactttggaagaaagttgattgccccggcctcagctccaggcagtatgggtggc
cctgtgcctgggagcaacagcagcagctctttctctgctgccgtccccttcaggacctcc
gcagaagccccgaggcatcattctcagcagcagcggcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcggttgatgaagtctgaaagcatgccg
gtacagttgaacaaagggcaaagtccgaaaaccatcagttcatctccgagtatggagagt
ttgcccgggggaagagaaccccctggctccccgccttcatctgctaccaaaagggattcc
tttttcagccacatcgcccgctcccgctcacacagcaaagccatgggcagaaaagaatct
gaagaagaattagaagcccagatttccttcctacaaggtcagctgaatgacctggatgcc
atgtgcaagtattgcgcaaaggtcatggacatgcatcttgtaaatattcaagatgtggta
ttacaagagaatttggaaaaagaagatcaaattctggtgtccttggcaggattaaaacag
atcaaagacattctgaaaggttccctgcgcttcaaccagagccagctggaggctgaagag
aacgaacagattaccatcgctgatgaccactactgctccagtggccaggaccagggcacc
caaggccctagggccgccaagcaggcctcttcagagatgccagggtgcacaggtggagcg
acctcagacgacttcattctggtttctaaagaagatgaggggcgccgtgcgaaggaggcc
ttctcaggccaggcccagcccctgctcaccctcagaaacacgtctgggaaaagtcgagtc
ccaacctgctccccactggtgttctcagacccactgatgggcccagcctcagcctcctcc
agcaaccctagctccagcccagatgatgacagcagcaaggactctggcttcaccatcgtg
agccccttggacatctga
DBGET
integrated database retrieval system