Rattus norvegicus (rat): 501688
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Entry
501688 CDS
T01003
Symbol
Lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
501688 (Lsm11)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
501688 (Lsm11)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
501688
NCBI-ProteinID:
NP_001166855
RGD:
1565523
Ensembl:
ENSRNOG00000005450
UniProt:
A6HDQ3
F7FQ27
LinkDB
All DBs
Position
10:complement(30869168..30887275)
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AA seq
360 aa
AA seq
DB search
MEEREWGARSARAGSPASPPSPRLDVSSYSFDPLLALYAPRLPPIPYPNAPCFNNVAEYE
SFLKGGRTGRGRARGTGEPASAGTSTGTSTGAGTSSRARRRAAPTPDPERIQRLRRLMVV
KEDTDGTAGSRRQGPGRSKKAPRNVLTRMPLHEGSPLGELHRCIREGVKVNVHIRTFKGL
RGVCTGFLVAFDKFWNMALTDVDETYRKPVLGKAYERDSSLTLTRLFDRLKLQDSKKEAD
SKSAVEDSTLSRYSQTSTWKVASVWGRGDTDRGSHRRSRSVPSSLQASAREESRSELSGR
TTRTEGSSVGGTFSRATTLSRGQSRKKKRKPKVDYQQVFTRHINQIFIRGENVLLVHLAQ
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgcgagtggggggcgaggtcggctcgcgccggcagcccagccagcccgccc
agcccgcggctggacgtcagctcctacagcttcgacccgctgctggccctgtacgcgccg
cgcctgccgcccattccttaccccaacgctccctgcttcaacaacgtggcggagtacgag
agcttcctgaagggcgggcgcaccgggcgcggtcgagctcggggcacgggagagccggcc
tcggcgggaacctccaccggaacctccacgggagccgggacctcgtccagggcccgtcgc
cgagccgcgcccaccccggatcccgagcgcatccagcgcctgcgccggctcatggtggtc
aaggaggacacggacggcacggccgggtcgcgacgccagggcccggggcgcagcaagaag
gcaccccgcaacgtgctcacgcggatgcccttgcatgagggtagccctctgggcgagctg
caccgctgcatccgagagggggtgaaggtgaacgtgcacatccgcactttcaagggactc
cgcggcgtctgcactggcttcctcgttgccttcgacaagttctggaacatggccctcaca
gacgtggatgagacctaccgtaaacctgtcttaggcaaagcatacgaacgggattcttcg
ctgactctcactaggctatttgatcggctgaaactccaagattccaaaaaggaagcggat
tccaagtctgcagtggaggactccaccctgtctcgttactcccagacatctacttggaag
gtggcttcagtgtggggacgaggagacactgaccgaggctcacacaggcgctcccgctcc
gtcccttcttccctgcaggcatctgcaagggaggagtccaggtctgagctgtcagggagg
actacacggacagaagggtccagtgtgggaggtaccttctccagggccaccaccctttca
cggggccagtcccgtaagaaaaagcgaaagcccaaggtggattaccagcaagtgtttact
cgacacataaatcagattttcattcgaggtgagaatgtcctgctggttcatcttgcacag
tga
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