Rattus norvegicus (rat): 502020
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Entry
502020 CDS
T01003
Symbol
Lrch1
Name
(RefSeq) leucine-rich repeat and calponin homology domain-containing protein 1
KO
K28937
Leucine-rich repeat and calponin homology domain-containing protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
502020 (Lrch1)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Phagocytosis
Others
502020 (Lrch1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_1
LRR_4
CH
LRR_LRWD1
LRR_13
CAMSAP_CH
CDC24
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
502020
NCBI-ProteinID:
NP_001128199
RGD:
1595678
Ensembl:
ENSRNOG00000009412
UniProt:
B2GV98
LinkDB
All DBs
Position
15:complement(56469403..56659201)
Genome browser
AA seq
677 aa
AA seq
DB search
MATPGSEPQAFAPALSVTALHPHIHQHHQHHGSTGSAGFNLPLNRGLERALEEAANSGGL
NLSARKLKEFPRTAAPGHDLSDTVQADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIP
EAIVNLQMLTHLNLSRNQLSALPACLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVS
CNEITALPQQIGQLKSLRELNVRRNYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMK
QLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTADSLYLHSIERPHSHQHVED
SKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNVPMSNIAEEDQTTKEDACHRLAPAEGDF
QPTPSLLGDSGSSGQEREQFAGRADVLHCELMNYIKDQAEDCEELLRIEEDAHWQTEELL
NSSKDQDLDIVMIEQLREAEDLLQGPNGLTTDITERSILNLYPMCSAEALEFPDSSLNGQ
LQLERSPEREVQNDVTLQSNGSQCSPNEIREDSPSGSPTANITAPFGLKPRSVFLRPQRN
LESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLANHV
RPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVKVG
MTVQALLDVTVTKALFT
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgggaagcgaaccccaagctttcgcgcccgccctctcggtaaccgccctg
cacccgcatatccaccagcaccaccagcaccacggaagcacgggcagcgcgggcttcaac
ctgcccttgaaccgtggtttggagcgcgcgctagaggaggcagccaattctgggggcttg
aacctgagcgccaggaagctgaaggaatttcccaggactgcagccccgggacatgacctc
tcggacacggttcaggcagatctatctaaaaacagactggtggaagtgccaatggagctg
tgccatttcgtatcactggaaattcttaacctgtatcacaactgtatcagagtcattccc
gaggccattgttaatttgcagatgttgacccacctgaacttgagtcgaaatcagctgtct
gccctgcccgcctgcctgtgtggtctgcctctcaaagtcttaatcgcaagcaacaacaag
cttggatccctgcctgaagagataggtcagctcaaacagttaatggagttggatgtcagc
tgcaatgagatcacagccttgccccagcagataggccagctgaagtctctccgggaactg
aatgtccgaagaaattaccttaaggttttaccaccagagctagtagatctccccttggta
aagtttgacttttcctgcaacaaagtgctggtgatccccgtctgctttcgggagatgaag
caactgcaagtgctcctccttgagaacaaccccctgcagtccccgccagctcagatttgc
acgaaaggaaaagtgcacatatttaagtacctgagcatacaggcatgccagataaagaca
gccgactccctctacctgcactccatagagaggccccattcacaccagcacgtggaagac
agtaagaaggactctgactcgggggttggaagtgataatggagataagcggttatctgcc
actgagccctctgatgaggacacggttagcctcaacgtgcccatgtcgaacatcgcagag
gaagaccagaccaccaaggaggatgcgtgccatcgactcgcccccgctgaaggagacttt
cagccgacaccttcccttttgggtgacagtggcagctcaggacaagaaagagagcagttt
gctggccgtgcagatgttctacactgcgaacttatgaactatattaaggaccaggcagaa
gactgtgaagagctattacggatagaagaggatgctcactggcagacggaagaactacta
aattcatccaaagaccaggatttggatatagtgatgatcgagcagctgagagaggcagaa
gatttgctgcagggtcccaacggtctaaccacggacattacagagagaagtattttgaat
ctgtaccccatgtgctcagcagaagccttagaattccctgattcttcactcaatggtcag
ttgcagctcgagaggtctccagagcgtgaggtgcaaaatgatgtaacgttacagagtaat
ggaagccagtgttctccaaatgagataagagaggactccccttcagggtctcccactgca
aacatcacagctccatttggcctgaagcctcgttcagtgtttctaagacctcagagaaac
ttggaatctatagacccgcagtttacgattcggaggaagatggagcagatgagagaggag
aaggagctggtggagcagctccgtgagagcatcgagatgaggttgaaggtgaccctgcat
gaagacctgggggcagcactcatggatggcgtagtgctctgccacctggccaaccacgtc
cgaccgagatctgtcgccagcatccacgtcccctcacctgccgttcccaaactcagcatg
gccaagtgccggaggaatgtggaaaacttcctggaagcgtgcagaaaacttggcgttccc
gaggaaaagctctgtctgcctcatcacatccttgaagagaaaggcctggtcaaagtgggc
atgactgttcaagcgctgttggacgtcaccgtcacaaaagctctgttcacatga
DBGET
integrated database retrieval system
