Rattus norvegicus (rat): 50522
Help
Entry
50522 CDS
T01003
Symbol
Ubc
Name
(RefSeq) polyubiquitin-C isoform 3 precursor
KO
K08770
ubiquitin C
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03320
PPAR signaling pathway
rno04120
Ubiquitin mediated proteolysis
rno04137
Mitophagy - animal
rno04140
Autophagy - animal
rno05012
Parkinson disease
rno05022
Pathways of neurodegeneration - multiple diseases
rno05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
50522 (Ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
50522 (Ubc)
04137 Mitophagy - animal
50522 (Ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
50522 (Ubc)
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
50522 (Ubc)
09164 Neurodegenerative disease
05012 Parkinson disease
50522 (Ubc)
05022 Pathways of neurodegeneration - multiple diseases
50522 (Ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
50522 (Ubc)
Ubiquitin system [BR:
rno04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
50522 (Ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
50522
NCBI-ProteinID:
NP_059010
RGD:
621244
Ensembl:
ENSRNOG00000057823
UniProt:
Q63429
Structure
PDB
PDBj
LinkDB
All DBs
Position
12:36899673..36905275
Genome browser
AA seq
810 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPS
VNTKKVKQEDTRTFLTTVSRKSPSCACSWV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt
gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagattacaac
atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt
gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa
aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggag
tccaccttgcacctggtccttcgcctcagagggggcatgcagatctttgtgaagaccctg
acaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaaaatgtcaaggca
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggccgcaccctgtcagactacaacatccagaaggagtccaccttgcac
ctggtccttcgcctcagagggggcatgcagatctttgtgaagaccctgacaggcaagacc
atcaccctggaggtcgagcccagtgacaccattgaaaatgtcaaggcaaagatccaggac
aaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggccgcaccctgtcagattacaacatccagaaggagtccaccctgcacctggtccttcgc
ctcagagggggcatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggag
gtcgagcccagtgacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatc
ccccctgaccagcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctg
tcagactacaacatccagaaggagtccaccctgcacctggtccttcgcctcagagggggc
atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt
gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtctgactacaac
atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt
gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa
aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggag
tccaccttgcacctggtccttcgcctcagagggggcatgcagatctttgtgaagaccctg
acaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaaaatgtcaaggca
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggccgcaccctgtctgactacaacatccagaaggagtccaccctgcac
ctggtcctgcgcctcagagggggcatgcagatctttgtgaagaccctgacaggcaagacc
atcaccctggaggtcgagcccagtgacaccattgaaaatgtcaaggcaaagatccaggac
aaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggccgcaccctgtcagactacaacatccagaaggagtccaccctgcacctggtccttcgc
ctcagagggggcatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggag
gtcgagcccagtgacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatc
ccccctgaccagcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctg
tcagactacaacatccagaaggagtccaccctgcacctggtcctgcgcctcagagggggc
atgcagatctttgtgaagaccctgacaggcaagaccatcactctggatgtcgagcccagt
gttaacaccaagaaggtcaaacaggaagatactcgtacctttctcaccacagtatctaga
aagagcccttcttgtgcttgttcttgggtttga
DBGET
integrated database retrieval system
