Rattus norvegicus (rat): 54252
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Entry
54252 CDS
T01003
Symbol
Mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
54252 (Mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
54252 (Mid1)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
54252 (Mid1)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
54252 (Mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-RING_2
zf-C3HC4_2
zf-RING_5
NDNF
U-box
Motif
Other DBs
NCBI-GeneID:
54252
NCBI-ProteinID:
NP_075216
RGD:
2640
Ensembl:
ENSRNOG00000003613
UniProt:
P82458
A6K2D8
LinkDB
All DBs
Position
X:complement(27678248..28053049)
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQERRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPH
PRRVGILLDYDNGSIAFYDALNSIHLYTFDVALAQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgtcctatttgtctggagctttttgaggaccct
ctcctgcttccctgtgcacatagcctctgtttcaactgtgcccaccgcatcctggtctct
cactgtgccaccaacgagcctgtggagtccatcaacgccttccagtgccccacctgccgg
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgcaacgtcaccttacaa
aacatcattgacaggtttcagaaagcatccgtgagtgggcccaattctcccagtgagacc
cgcagggagcgggcctttgacgccaacaccatgtcttctgccgagaaagttctctgccag
ttctgtgaccaggatcctgcccaggatgctgtgaagacctgtgttacttgcgaagtgtcc
tactgtgatgagtgcctgaaagccactcatccgaataagaagccctttacaggccatcgt
ctgattgagccaatcccggactcgcacatccgggggctaatgtgcttggagcatgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgcgatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaatttggagagtaatctcaccaatcttattaagagaaacacagaactggagaccctt
ttggctaaactcatccaaacttgtcaacatgttgaggtcaatgcatcccgtcaagaagcc
aagttgacagaggaatgtgatcttctcattgaaattattcaggaaagaagacaaattatt
ggaacaaagattaaagaaggcaaggtgatgaggctccgcaaattagctcagcagattgca
aactgtaaacaatgcattgaaaggtctgcatcactcatttcccaagcagaacactcactg
aaggagaatgaccatgcccgttttctacagacagcaaagaatatcactgagagagtctcc
atggcaactgcatcctcccaggtcctaattcctgaaatcaacctcaatgacacatttgac
acctttgccttagatttttcccgggagaagaaactgctagaatgtttggattacctaaca
gctcccaaccctcccacaattagagaagagctctgcacggcttcctatgacaccatcact
gtccactggacttcggatgatgagttcagtgtggtctcctatgaactccagtacaccata
ttcactggacaagccaatgtcgttagtctttgtaactcggcagatagctggatgattgtg
cccaacatcaagcagaaccactatactgtgcatggcctacaaagtggcaccaagtatatc
ttcatggtcaaggccatcaaccaggcaggcagccgcagcagtgagcctgggaagctgaag
acaaacagtcagccatttaaactggatcccaaatctgctcatcgaaaactcaaggtgtcc
catgacaacctgactgttgaacgtgatgagtcatcatccaaaaagagtcacacacctgaa
cgcttcactagccaagggagctatggcgtggctggaaatgtgtttattgacagtggccgt
cattactgggaagtggtcataagcggaagcacatggtatgccattggccttgcgtacaaa
tcagctccaaaacatgaatggattgggaagaattctgcttcctgggccctttgccgctgc
aacaataactgggtggtgagacataacagcaaggaaatacccattgaaccagccccccac
ccccggcgtgtaggcatcctgctggactatgataatggctcaatcgctttttatgatgct
ttgaactccatccacctctataccttcgatgtggcgcttgcgcagcctgtgtgccccacc
tttactgtgtggaacaagtgtttgacgattataactggtcttcccatcccagaccatttg
gactgtacagaacagctaccttga
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