Rattus norvegicus (rat): 54350
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Entry
54350 CDS
T01003
Symbol
Scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
54350 (Scfd1)
Membrane trafficking [BR:
rno04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
54350 (Scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
54350 (Scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
54350
NCBI-ProteinID:
NP_062237
RGD:
619828
Ensembl:
ENSRNOG00000031203
UniProt:
Q62991
A6HBG9
Structure
PDB
LinkDB
All DBs
Position
6:74531225..74609463
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AA seq
637 aa
AA seq
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MVGSKMAASIRERQTVALKRMLNFNVPHVKNSPGEPVWKVLIYDRFGQDIISPLLSVKEL
RDMGITLHLLLHSDRDPIRDVPAVYFVMPTEENIDRLCQDLRNQLYESYYLNFISAISRS
KLEDIANAALAANAVTQVAKVFDQYLNFITLEEDMFVLCNQNKELVSYRAINRPDITDTE
METVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDP
LGTGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESTGVENSPT
GARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGLE
GEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFEYE
EKIMSKTTLDKSLLDVISDPDAGTPEDKMRLFLIYYISAQQAPSEVDLEQYKKALTDAGC
NLSPLQYIKQWKAFAKMASTPASYGNTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQNL
PVTRILDNLMEMKSNPETDDYRYFDPKMLRSNDSSVPRNKSPFQEAIVFVVGGGNYIEYQ
NLVDYIKGKQGKHILYGCSEIFNATQFIKQLSQLGQK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaagcaagatggcggccagcattcgggaaaggcaaacagtggctctgaagcgg
atgttgaatttcaatgtgcctcatgttaaaaacagtcctggagaacccgtatggaaggta
ctcatctatgacagatttggccaagatatcatctctcctctgctgtctgtgaaggagctg
agagacatgggcatcaccctgcatctccttttgcactcagaccgagatccaattcgagat
gttcctgcggtgtactttgtgatgccaaccgaagaaaatattgacagactgtgccaggat
cttcgaaatcagctctatgaatcctattatttaaattttatttctgcgatttcaagaagt
aaactggaagacattgcaaatgcagcattggccgctaatgcagtcacacaggttgccaag
gtttttgaccagtatctcaattttattactttggaagaggacatgtttgtattatgtaat
caaaataaggaacttgtttcatatcgggccattaataggccagatatcacagacacagag
atggagactgttatggacactattgttgacagcctcttctgcttttttgttacattaggt
gctgttcccatcatccgatgctcaagaggaacggcagcagaaatggtggcagtgaaacta
gataaaaaactgcgggagaatctaagagatgcaagaaacagcctttttactggtgatcca
cttgggactggccagttcagcttccaaaggcccttattagtccttgtggacagaaacatt
gacttggcaacgcctctgcaccatacgtggacataccaagcgctggtacacgatgtcctg
gatttccacttaaacagagtaaatttggaagaatctacaggagtggaaaattctccaact
ggtgctagaccaaagaggaaaaacaagaagtcttacgatttaactccagttgataaattt
tggcagaaacataaaggaagtccattcccagaagtcgcagaatcagtccaacaagaacta
gaatcttacagagcacaagaagatgaggtcaaacgactgaagagcattatgggcctagaa
ggagaggacgaaggagccatcagcatgctttctgataacactgctaagctcacatcagct
gtcagttctttgccagaactccttgaaaaaaaaagacttatcgatctccatacaaatgtc
gccactgctgttttagaacacataaaggcaagaaaactggatgtatattttgaatatgaa
gaaaaaataatgagcaagactactctggataagtcccttctcgacgtcatatctgaccct
gacgcagggactccggaagacaaaatgaggctgtttcttatctactacataagcgctcag
caggcaccatctgaggttgatttggagcagtataaaaaggctttaacagatgcaggatgc
aaccttagccctttacagtatatcaaacagtggaaggcttttgccaagatggcctcaact
cctgccagctacggaaacactaccactaaaccaatgggtctcttgtcccgagtcatgaat
acaggatcccagtttgtgatggaaggcgtcaagaacctggtattgaagcagcagaatcta
cctgttactcggattttagacaatctcatggagatgaagtcaaaccccgagactgatgat
tacagatattttgatcccaaaatgctgcggagcaatgacagctcagttcctaggaacaaa
agtccattccaagaggccattgtctttgtggtaggaggaggcaactatattgagtatcag
aatcttgttgactacataaagggaaagcaaggcaagcatattttgtatggctgcagtgag
atttttaatgctacacagttcataaaacagctgtcacagcttggacaaaagtaa
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