KEGG   Rattus norvegicus (rat): 548106
Entry
548106            CDS       T01003                                 
Symbol
Pcdhb19
Name
(RefSeq) protocadherin beta-12 precursor
  KO
K16494  protocadherin beta
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    548106 (Pcdhb19)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   548106 (Pcdhb19)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th REJ
Other DBs
NCBI-GeneID: 548106
NCBI-ProteinID: NP_001395838
RGD: 1549697
UniProt: A6J375
LinkDB
Position
18:29478848..29481656
AA seq 802 aa
MKNRGEHHLQTRQVLLLFVFLGMSRAHSVARRLSVVEEMPSGALVGNLEKDLGLEVGELS
ARGAQVASNNNKLPLQLNINTGDLLLSEPLDREELCGSIEPCVLHFQVLLKNPLKILQVE
LQVMDVNDNSPVFLEKEMVLEIPENSPVGAMFLLESATDLDVGINTVKSYMISQSSHFHV
TMRVNPDGRKYPELVLDKVLDYEEQPELSLILTALDGGTPSRSGTALVQVEVIDANDNSP
EFDQMFYEVRIPENSRLGSLIITASASDLDSGTNGELSYAFSHASEDIRKTFAINKNSGE
ISLIGYLDFETTESYSIIIKATDRGGLFGKSTVRIQVMDVNDNFPEIAVSSFVSPIPENA
VETLVMIFSIQDKDSGENSKMVCSIPEDLPFVLKSSIENYYHLETERALDRENRAEYNIT
ISVSDQGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHENNSPALHIGTISATDSDS
GSNAHITYSLMPPRDPQLALDSLISINADNGQLFALRALDYEALQAFEFRVGATDRGSPA
LSSQALVRVVVLDDNDNAPFVLYPLQNASAPYTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPPRSASVMLQV
LLVDGFSQPYLPLPEVARDSMPDVDNMLTLYLVIALASVSSLFLLSVMLFVGVRLCRRAR
AASLGGCSVPEGHFPDHLVDISGAGTLSQSYQYEVCLMGGSGTNEFRFLKPVSPNLKPQF
PGKEMEESSTLRNSFGLFSDCN
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgaagaaccgaggggaacaccatctgcagacaaggcaagtcttgcttctctttgttttc
ctaggaatgtctcgagcacattctgtggccaggagactttcagtggtggaggaaatgccg
agtggggccttggtagggaatttggaaaaggacctggggcttgaggtgggtgagctgtct
gcacgaggggctcaagtggcctctaataataataaactgcctttgcaattgaacataaat
acaggagatttgctcctaagtgaaccactagaccgtgaggagctgtgtggctccattgag
ccctgtgtgctccatttccaggtgttactgaaaaaccccttaaagattttgcaagttgag
cttcaggtcatggatgtaaatgacaactcccctgtattcttggaaaaggaaatggtttta
gaaattccagaaaacagtcctgttggtgctatgttcttactagaaagtgcaactgattta
gatgtaggaatcaatactgttaaaagctacatgataagccagagctctcatttccacgtt
acaatgagagttaatcccgatggcaggaaatacccagagttagttctggacaaagtgctg
gattatgaggagcagcctgagcttagtctcatcctcacggctttggatggagggactcca
tccaggtctgggactgcattggttcaagtggaagtcatagatgccaatgacaactcccct
gaatttgaccaaatgttctatgaagtgaggattccagagaatagcaggcttggctcactg
attatcactgcatcggcttcggacttagactcgggaactaatggtgaactctcatatgcc
ttttcccatgcatcagaggatattcgaaaaacatttgcaattaataaaaattctggagaa
ataagtttaataggctatttggactttgaaacgactgaatcctactcaataatcattaaa
gctaccgatcggggaggactttttgggaaatctacagtaagaattcaggtgatggatgtg
aacgacaattttcctgaaattgctgtgtcatcatttgtcagtccaatcccagaaaatgct
gtagagactttagttatgatttttagtattcaagacaaggactcaggagagaacagcaag
atggtttgcagtattccggaggatctcccatttgtgctaaaatcttctattgaaaattac
taccacttagaaacggagagagcactggatagagagaacagagctgagtacaacatcacc
atctctgtctcagaccagggcacacccaggctcacaacccagcacaccataacagtgcag
gtgtccgacatcaacgacaacgccccggccttcacccaaacctcctacaccatgtttgtc
cacgagaacaacagccccgccctgcacataggcaccatcagcgccacagactcagactca
ggctccaatgcccacatcacctactcgctgatgccgcctcgagacccacagctggccctc
gactcgctcatctccatcaatgctgacaacgggcagctgttcgcgctcagggcgctggac
tatgaagcgctgcaggccttcgagttccgcgtgggtgccacagaccgaggctcacccgcg
ctcagcagtcaggcactggtgcgcgtggtggtgctggacgacaatgacaatgcgcccttc
gtgctctacccgctgcagaacgcctcagcgccctacacagagctgctgcccagggcggca
gagcctggatacctggttaccaaggtggtagctgtggaccgcgactctggccagaatgcc
tggctgtcattccagctgctcaaggccacggagcccgggctatttagtgtgtgggcgcac
aatggtgaggtgcgcaccactaggttgctgagcgagcgtgatgtgcccaaacacaggttg
ctgctgctggtcaaggacaatggagatcctccgcgctctgccagtgtcatgctgcaagtg
ctactagtggatggcttctcccagccctacctgcctctgccagaggtggcgcgggactcc
atgccggatgttgacaacatgctcacgctgtacctggttattgctttggcctctgtgtct
tctctcttcctcctgtctgtgatgctgtttgtgggagtgaggctgtgcaggagagccagg
gcagcctctctgggtggctgttctgtacctgagggacactttcctgatcatctcgtcgac
attagcggtgcgggaactctgtcccagagctaccagtatgaggtgtgtctgatgggaggt
agtgggacaaatgagttcagattcttgaagccagtttcccccaatttaaaaccccagttc
cctgggaaagaaatggaggaaagttctactttgcgcaatagttttgggttatttagtgac
tgtaattga

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