Rattus norvegicus (rat): 56084
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Entry
56084 CDS
T01003
Symbol
Hgs
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform 1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03250
Viral life cycle - HIV-1
rno04144
Endocytosis
rno04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
56084 (Hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
56084 (Hgs)
04145 Phagosome
56084 (Hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
56084 (Hgs)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
56084 (Hgs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
FYVE_CARP1-2
Maestro_HEAT
UIM
DUF1071
Motif
Other DBs
NCBI-GeneID:
56084
NCBI-ProteinID:
NP_062260
RGD:
69225
Ensembl:
ENSRNOG00000036696
UniProt:
Q9JJ50
LinkDB
All DBs
Position
10:106237988..106256174
Genome browser
AA seq
771 aa
AA seq
DB search
MGRGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHV
ALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAFR
NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVVTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNKKAEGKAASTTELPPEYLTS
PLSQQSQLPPKRDETALQEEEELQLALALSQSEAEEKERMRQKSTYTAHPKSEPAPLASS
APPAGSLYSSPVNSSAPLAEDIDPELARYLNRNYWEKKQEEARKSPTPSAPVPLTEPAAQ
PGEGHTAPNSMVEAPLPETDSQPITSCSGPFSEQYQNGESEESHEQFLKALQNAVSTFVN
RMKSNHMRGRSITNDSAVLSLFQSINSTHPQLLELLNRLDERRLYYEGLQDKLAQIRDAR
GALSALREEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQRLQEQEK
ERQMRLEQQKQTVQMRAQMPAFPLPYAQLQAMPTAGGVLYQPSGPTSFPGTFSPAGSVEG
SPMHGVYMSQPAPATGPYPSMPGTTADPSMVSAYMYPAGAPGAQAAPQAQAGPTTNPAYS
SYQPTPTPGYQAPQSLPAISQPPQTSNIGYMGSQPMSMGYQPYNMQNLMTTLPGQDASLP
AQQPYITGQQPMYQQMAPSTGPPQQQPPVAQPPPTQGPPAQGNETQLISFD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaggcagcggcaccttcgagcgtctcctagacaaagccaccagccagcttcta
ttggagacagactgggagtccattctacagatctgcgacctgatccgtcagggggacaca
caagcaaaatatgctgtaaactccatcaagaagaaggtcaatgataagaacccacatgtg
gctttgtatgctctggaggtgatggagtctgtggtaaagaactgtggccagacagtccat
gatgaagtggccaacaaacagaccatggaagaactgaaggagctgctgaagaggcaagtg
gaagttaatgttcggaacaagatcttgtacctgatccaggcctgggcacatgcgttccgg
aatgaacccaagtacaaggtggtccaggacacataccagatcatgaaggtagaaggacat
gtcttccctgagtttaaggagagcgacgccatgtttgctgctgaaagagcccctgactgg
gtggatgctgaggagtgccatcggtgcagagtacagtttggagtggtgacccgcaagcat
cactgccgagcgtgtgggcagatcttttgtggcaagtgttcctccaagtactccaccatc
cccaagttcggcattgagaaggaagtgcgcgtgtgtgagccctgctatgagcagctgaac
aagaaggcagaagggaaagctgcctctaccactgagctgcccccagagtacctgaccagc
cccctgtcacagcagtctcagctgcccccaaagcgggatgagacagcactgcaagaagag
gaggagctacagctggcgctggccctatcacagtcagaggctgaggagaaggaaaggatg
agacagaagtcaacatacacagcgcatccaaagtcagagcctgcgcccttggcttcctct
gcacccccagctggtagcctgtactcctcgcctgtgaactcatcagcacctctggctgag
gacatcgaccctgagcttgcaagatacctcaaccggaactactgggagaagaaacaggaa
gaagctcggaagagccccacaccatctgcacctgtgcccctgaccgagccagctgcccag
cccggagaaggacatacagcccccaacagcatggtagaggcccctcttccagagacagac
tctcagcccataacttcctgcagtggcccctttagtgagcagtaccagaacggggagtcg
gaggagagccacgagcagttcctcaaggccctgcagaatgcagtcagcacttttgtcaac
cgcatgaagagcaaccacatgaggggccgcagtatcaccaatgactcggctgtgctgtcc
ctcttccagtccatcaatagcacacacccacagctgctcgagctgctcaaccggctggat
gagcgcaggctgtactacgaggggcttcaggacaagctggcacagatacgtgatgcccga
ggggccctgagtgccctgcgtgaagagcacagggagaagctgcgccgggcagctgaggag
gcggagcgtcaacgtcagatccagctggcacagaagctggagatcatgagacaaaagaag
caggagtatctggaggtgcagagacagctagctatccagcgtctgcaggaacaggagaag
gaacggcagatgcgcctggagcaacagaagcagactgtccagatgcgtgcccagatgcct
gccttccccttgccttatgcccagctccaggctatgcccacagctgggggtgtactctac
cagccctcaggcccaaccagctttcctggcacctttagcccagcaggctcagtagagggc
tctccgatgcatggtgtgtatatgagccagccagccccagccactggcccctaccccagc
atgcctggcaccacagcagatcccagcatggtcagcgcctacatgtacccagcaggtgcc
cctggggcacaggcagcccctcaggcccaggccgggcccaccaccaaccctgcctactcc
tcgtaccagcctactccaaccccaggctaccaggccccacagagcctcccagccatctcc
cagcctccacagaccagcaacattggctacatggggagccagccaatgtccatgggctac
cagccatacaacatgcagaatctcatgaccacccttccaggccaggatgcgtctctgcca
gcccagcagccctacatcacagggcagcagcccatgtaccagcagatggcacccagcact
ggccctccccagcagcagccccctgtggcccaaccgccacctacacagggaccgccagca
cagggcaatgagacccagctcatctccttcgactga
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