Rattus norvegicus (rat): 58920
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Entry
58920 CDS
T01003
Symbol
Gpc1
Name
(RefSeq) glypican-1 precursor
KO
K08107
glypican 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05205
Proteoglycans in cancer
rno05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
58920 (Gpc1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
58920 (Gpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rno00535
]
58920 (Gpc1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rno00537
]
58920 (Gpc1)
Proteoglycans [BR:
rno00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
58920 (Gpc1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rno00537
]
Others
58920 (Gpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
58920
NCBI-ProteinID:
NP_110455
RGD:
61853
Ensembl:
ENSRNOG00000049437
UniProt:
P35053
Q6P7Q2
LinkDB
All DBs
Position
9:100843645..100871458
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AA seq
558 aa
AA seq
DB search
MELRARGWWLLCAAAALVACARGDPASKSRSCSEVRQIYGAKGFSLSDVPQAEISGEHLR
ICPQGYTCCTSEMEENLANHSRMELETALHDSSRALQATLATQLHGIDDHFQRLLNDSER
TLQDAFPGAFGDLYTQNTRAFRDLYAELRLYYRGANLHLEETLAEFWARLLERLFKQLHP
QLLLPDDYLDCLGKQAEALRPFGDAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV
PLAPECSRAVMKLVYCAHCRGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLI
TDKFWGPSGAENVIGSVHMWLAEAINALQDNKDTLTAKVIQGCGNPKVNPHGSGPEEKRR
RGKLALQEKSSTGTLEKLVSEAKAQLRDIQDYWISLPGTLCSEKMAMSPASDDRCWNGIS
KGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRGAYGGNDVDFQD
ASDDGSGSGSGGGCPDDACGRRVSKKSSSSRTPLTHALPGLSEQEGQKTSAATRPEPHYF
FLLFLFTLVLAAARPRWR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgggcccgaggctggtggctgctgtgcgcggccgccgcgctagtcgcctgc
gcccgcggggaccccgccagcaagagccggagctgcagcgaagtccgccagatctacggg
gctaagggctttagcctgagcgacgtgccccaggcagagatctcgggagagcacctgcgg
atctgcccccagggctacacctgctgcaccagtgagatggaggagaacctggccaaccac
agccggatggagctggagaccgcactccacgacagcagccgtgccctgcaggctacgctg
gccacccagctgcatggcatcgatgaccacttccagcgcctgctgaatgactcggagcgt
acactgcaggatgcttttcccggggcctttggggacctgtacacgcagaacactcgggcc
ttccgggacctgtatgctgagctgcgtctctactaccgaggggccaacctacaccttgag
gagacactggccgagttctgggcacggctgctggagcgtctcttcaagcagctgcacccc
cagctgctgctgcccgatgactatctggactgcctgggcaagcaggcagaggcactgcgg
ccgtttggggatgcccctcgagaactgcgcctgagggccacccgtgcttttgtggcggca
cgatcctttgtgcagggcctgggtgtggccagtgacgtagtccgaaaggtggcccaggtt
cctctggccccagaatgttctcgggctgtcatgaagttggtctactgtgcccattgccgg
ggagtccctggtgcccggccctgtcccgactattgccgaaatgtgctcaaaggctgcctt
gccaaccaggccgacctggatgccgagtggaggaacctcctggactccatggtgctcatc
actgacaagttctggggcccgtcgggtgcggagaatgtcattggcagtgtgcatatgtgg
ctggcggaggccatcaacgccctccaggacaacaaggacacactcacagctaaggtcatc
cagggctgcggaaaccccaaggtcaatccccatggctctgggcctgaggagaagcgtcgc
cgtggcaaactggcactgcaggagaagtcctccacaggtactctggaaaagctggtctct
gaggccaaggcccagctccgagacattcaggactactggatcagcctcccagggacactg
tgtagtgagaagatggccatgagtcctgccagcgatgaccgctgctggaatgggatttcc
aagggccggtacctacctgaggtgatgggtgatgggctggccaaccagatcaacaaccct
gaagtggaggtggacatcaccaagccggatatgaccatccggcagcagatcatgcagctc
aagatcatgaccaaccgtttacgtggcgcctacggtggcaatgatgtggacttccaggat
gccagtgatgacggcagtggctccggcagcggtggcggatgcccagatgacgcctgtggc
cggagggtcagcaagaagagctccagctcccggacccccttgacccatgccctccccggc
ttgtcagaacaggagggacagaagacctcggccgccactcgcccagagcctcactacttc
tttctgctcttcctgttcaccttggtccttgctgcagccaggcccaggtggcggtaa
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