KEGG   Rattus norvegicus (rat): 58983
Entry
58983             CDS       T01003                                 
Symbol
Rabggta
Name
(RefSeq) geranylgeranyl transferase type-2 subunit alpha
  KO
K14050  geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rno01006]
    58983 (Rabggta)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    58983 (Rabggta)
Enzymes [BR:rno01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     58983 (Rabggta)
Prenyltransferases [BR:rno01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   58983 (Rabggta)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    58983 (Rabggta)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    58983 (Rabggta)
SSDB
Motif
Pfam: RabGGT_insert PPTA LRR_4 LRR_9 LRR_8 LRR_1 LRR_LRWD1 LRR_14
Other DBs
NCBI-GeneID: 58983
NCBI-ProteinID: NP_113842
RGD: 621697
Ensembl: ENSRNOG00000030483
UniProt: Q08602 A6KH43
Structure
LinkDB
Position
15:complement(33176268..33183320)
AA seq 567 aa
MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP
DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRL
PEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSS
WHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAE
PHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSHVW
LCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEK
STVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA
YLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPP
ALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNL
QGNSLCQEEGIQERLAEMLPSVSSILT
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgcatgggcgcctgaaggtgaagacgtcggaagagcaggcagaggccaaaaggctagaa
cgagagcagaagctaaagctctaccagtcagccactcaagctgtcttccagaagcgtcag
gctggtgagctggatgaatcagtgctagaactgacaagccagattctgggagccaaccct
gattttgccaccctctggaactgtcgaagagaagtactccagcacctggaaaccgagaag
tcccctgaggagtcagctgctcttgtgaaggcagaactgggcttcctagagagctgtctt
cgtgtgaaccctaagtcctatggcacttggcaccaccgctgctggctgctgagtcgcctg
cctgagcccaactgggcccgggagctggagctatgcgctcgcttcctcgaggccgatgag
cggaactttcattgctgggactatcggcgatttgtagccgcacaggctgctgttgcccct
gcagaggaactagccttcactgacagcctcatcacccgtaacttctccaactattcctcc
tggcattatcgctcctgcctcttgccacagctgcacccccagccagactctggcccacag
ggtcggctccctgaaaatgtactgctgaaagagctggagttggtgcagaatgccttcttt
actgaccccaacgatcagagtgcctggttctatcaccgctggctcctgggtcgggcggag
ccccacgatgttctatgctgtgtgcatgtgagccgggaggaggcctgtctgtcggtctgc
ttttctcgtcccctgacagtgggctccagaatggggaccttgctactcatggttgatgag
gcacctttgagtgtggagtggaggactccagatggcaggaaccggcccagccatgtctgg
ctctgtgacctgcctgctgcctctctcaatgaccagttgccccagcacacgtttcgtgtc
atctggacaggaagtgatagccagaaggagtgtgtgcttttaaaagaccgcccagaatgc
tggtgccgagactcagccactgatgaacagctattcaggtgtgagctgtcagtggaaaag
tccacagtgctgcagtctgagcttgaatcctgtaaggagctgcaggaactagagcctgag
aataaatggtgcctgctgaccatcatcctgctgatgcgagcactggaccccctcctctat
gagaaggaaacactgcagtacttcagtaccctcaaagctgtggacccaatgagagcagct
tacttggatgacctgcgcagcaagttcttgctggagaacagtgttctcaagatggagtac
gctgatgtacgcgtgctgcacctggctcacaaggatctcacagtgctctgccacctggaa
caactgctcttggtcactcatcttgacctgtcccataatcgactccgagccttaccccca
gccctggctgctctgcgctgtcttgaggtgctgcaggccagtgacaatgccctggagaac
gtggatggtgtggctaaccttccccggctacaagagctgttactatgtaataaccgcctc
caacagtctgcagcaatccagcctcttgtctcctgccccaggctagtcctcctcaacctg
cagggcaactcgctgtgccaagaagagggcatccaggagcgtttggctgagatgctaccg
tctgtcagcagcatcctcacctag

KEGG   Rattus norvegicus (rat): 25533
Entry
25533             CDS       T01003                                 
Symbol
Rabggtb
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rno01006]
    25533 (Rabggtb)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    25533 (Rabggtb)
Enzymes [BR:rno01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     25533 (Rabggtb)
Prenyltransferases [BR:rno01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   25533 (Rabggtb)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    25533 (Rabggtb)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    25533 (Rabggtb)
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C
Other DBs
NCBI-GeneID: 25533
NCBI-ProteinID: NP_619715
RGD: 3530
Ensembl: ENSRNOG00000009992
UniProt: Q08603 A6HWN7 A0A8I6GFF2
Structure
LinkDB
Position
2:complement(245504586..245510878)
AA seq 331 aa
MGTQQKDVTIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLM
GQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVV
AYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG
FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC
YSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL
LGEEQIKPVSPVFCMPEDVLQRVNVQPELVS
NT seq 996 nt   +upstreamnt  +downstreamnt
atgggcacacagcagaaggacgtcaccatcaagtcagatgcgcctgacaccctgctgctc
gagaagcatgctgattatatcgcctcgtacggctcaaagaaagatgattatgaatactgc
atgtccgaatacttgagaatgagcggcgtctactggggcctgacagtgatggacctcatg
gggcagcttcatcggatgaataaagaggagatactggtgtttatcaagtcgtgccagcat
gagtgtgggggagtcagtgccagcatcgggcacgacccccaccttctctacacgctcagt
gctgtccagattctcactctgtatgatagcatccatgtaatcaacgtagacaaagtggta
gcctatgttcagagtctacagaaagaagatggttcctttgctggagacatctggggagaa
atcgatacaagattctcattttgtgcagtggcaactttggctctcttgggcaaacttgat
gctattaatgtggaaaaggccattgaatttgttttgtcctgtatgaactttgatggtgga
tttgggtgcagaccaggctctgaatctcacgccggacagatctattgttgcacaggattc
ctggccataactagtcagttgcatcaagtgaactccgacctacttggttggtggctttgt
gaacgacagttgccctctggcggactcaatggaagacccgagaagttaccagatgtgtgc
tattcctggtgggtgttggcctccttaaagataatcgggagacttcattggattgacaga
gaaaagcttcgaagcttcatcttggcatgtcaagatgaagagacaggagggtttgcagac
aggccaggagacatggtggatccctttcacaccttgtttggcattgctggattgtcactt
ctgggggaagagcagatcaagcctgtcagccctgtcttttgcatgcctgaagacgtgctg
cagagggtgaatgtccagcctgaactagtgagctag

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