Rattus norvegicus (rat): 60324
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Entry
60324 CDS
T01003
Symbol
Synpo
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
60324 (Synpo)
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
60324
NCBI-ProteinID:
NP_067727
RGD:
620668
Ensembl:
ENSRNOG00000019181
UniProt:
Q9Z327
A6IXC1
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All DBs
Position
18:complement(56326369..56347359)
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AA seq
692 aa
AA seq
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MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNRETQQSSPNPPET
EEVPSPAADINQNPSSPNATLTTAASNSHHNQPTADVNQNPPATITPVQQNSSETQCSPN
GTLDSKPNTPSADDGQRPVPAEEVRSSILLIDKVSAPPSAASPFSREATPLSSSGPPAAD
LMSSSLLIGMQPSTLVASAEQEVSGHAAVTTPTKVYSEVHLTLAKPASVVNRTARPFGMQ
SPGTTSQIEQSPMMGRRHFGEKAWAPPASSMADRSPQPQRHIMARSPMVERRLVGQRSPV
VERRPLGNFTPPPTYAETLSTAPVASQVRSPPSYSTLYPSSDPKPPHLKGQVVPANKTGI
LEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGMEDEPFALGAE
ASNFQQEPIARDRSGPAAAEETVPEWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYAR
RQSRMEKYVIESSGHAELARCPSPTMSLPSSWKYTTNAPGGFRVASLSPARTPPASLYHG
YLPENGVLRPEPTKQQPHQMRPSLYALSPVKEPAKISSRATSSRASSRTVSPRAASPAKP
SSLDLVPNLPRAGLPPSPALPRPSRSSPGLYNAPVQDSLQPTAVSPTYSSDISPVSPSRA
WSPRAKQAPRPSFSTRNAGIEAQVWKPSFCFK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtactcagaggaagccagtctgctgcggcacctggagaaggttgccagtgag
gaggaagaagtaccattggtagtttacttaaaggagaatgcagccctgctgacagctaat
ggactgcacctgtcccagaaccgagagacccagcagtcctcaccaaaccctcctgaaacg
gaggaagtgcccagcccagctgcagatatcaaccagaacccctcctctcccaatgccacg
ctcaccacagcagcctctaacagccaccacaaccaacccaccgctgatgtcaatcaaaac
cccccagccactatcacccctgtccaacaaaattcatctgagacacagtgttccccgaat
ggcacgcttgattccaaacccaacactccaagcgctgatgatgggcagcgcccggtgcca
gcagaggaagtgaggtccagcattctcctgattgacaaggtgtccgctccaccatctgcc
gccagccccttctctagagaagctactcccctctccagctctgggccaccagctgcagat
ctcatgtccagctctctgctcattggcatgcagcctagcaccctagtggcatcagcagaa
caagaggtgtctggacatgcagctgtcaccacgcccactaaggtgtatagtgaagtacat
ctcacactagccaagcctgcatccgtggtcaacaggaccgccaggccatttgggatgcag
tcgccagggactaccagccagatagagcaaagtcccatgatgggaagacgacattttgga
gagaaggcctgggctcccccagctagcagtatggcggataggagtccccagccacagagg
cacataatggcccgcagtcccatggtagaaaggaggctggttgggcagcgaagcccggtt
gtagagagacgccccttaggaaactttaccccaccccccacctatgcggagactttgtca
acagcccccgtggcttcccaggttaggtctcctccctcttattctactctgtatcccagc
tctgaccccaagcctccccatttgaagggccaggtagttcctgccaacaagacaggaatt
ttggaagaatctatggcacgccgaggcagccggaaatcaatgttcacgttcgtggagaag
cctaaggtgacgccgaatccagacttgctggacctcgtgcagacagctgatgagaagcgg
aggcagagagaccaaggggaggtgggcatggaagacgagccctttgccctgggagctgag
gcctccaacttccagcaggagccaatagctcgggacaggtccggccctgcggcagctgag
gagactgtccctgaatgggcttcctgcctcaagtcaccccgtatccaggctaagccgaag
cccaaacccaaccagaatctctcagaggcctcagggaagggggctgagctctatgcccgc
cgccagtcacggatggagaaatacgtcatagagtcgtcaggccatgcggaattggctcgc
tgcccttcacctactatgtcattgccttcatcctggaagtacaccactaatgcccctggg
ggcttccgagtggcgtccttaagcccagcgcggactccgcctgcctctctctaccacggc
tatctgccagagaatggagtcctgcgcccagagcctaccaagcagcagccacaccagatg
aggccttcactctatgctctgtcgccggtcaaggaacctgccaagatctcatcacgtgcc
acctcgtcacgcgcttcgtcacgcactgtctcacctcgtgctgcctccccggccaagcct
agctccctggacctggtgcccaacctgcccagagcaggcctcccaccgtctcctgcgctt
cctcggccttcccgctcctccccaggcctctacaatgccccagtccaggacagcctccag
cccactgccgtgagccccacctacagcagtgatatctcccccgtgtctccctccagggcg
tggtctcctcgagccaagcaggcccccaggccttccttctccacccggaatgctgggatc
gaggcccaggtgtggaaaccttccttctgcttcaagtaa
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