KEGG   Rattus norvegicus (rat): 60384
Entry
60384             CDS       T01003                                 
Symbol
Copb2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    60384 (Copb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    60384 (Copb2)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    60384 (Copb2)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   60384 (Copb2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP PEP5_VPS11_N Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Helicase_dom4_arc HEAT_GCN1
Other DBs
NCBI-GeneID: 60384
NCBI-ProteinID: NP_068533
RGD: 628746
Ensembl: ENSRNOG00000060723
UniProt: O35142 A0A8I6GKN2 A6I2B6
LinkDB
Position
8:108040687..108062810
AA seq 905 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRATAQQEPDGKPASSPVIMASQTTHKEEKSFQELEDDLDTMELEDIDTTDINLDE
DILDD
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgcctcttcgacttgacatcaagagaaagctaactgctaggtctgatcgggttaagagt
gtggatttgcatccgactgagccatggatgctggctagtctttacaatggcagtgtgtgt
gtttggaatcatgaaactcagacgctggtgaagacctttgaagtgtgtgatctccctgtt
cgagctgcgaagtttgtcgcaaggaagaactgggtggtgacaggagcagatgatatgcag
attagagtgttcaattataacaccctggagagggtgcacatgtttgaagcacactcggat
tacatccgttgcattgctgttcatcccacccagccgttcattctcacaagcagtgatgac
atgcttattaagctctgggactgggacaaaaaatggtcttgttcacaagtgtttgaagga
cacacgcattatgttatgcagattgtgataaaccccaaagataacaatcagtttgccagt
gcctctctcgacaggaccatcaaggtgtggcagctgggctcttcatcaccaaacttcacg
ctggagggacatgaaaaaggcgtgaattgcattgattactacagtggtggtgataagcca
tacctcatttcaggtgcagatgaccggctcgttaaaatatgggattatcagaataaaact
tgtgtgcagaccctggagggacatgcccagaatgtgtcatgcgcaagcttccatcctgag
ctgcccatcatcatcacagggtcagaagacggaacggtgcgaatctggcactccagcacc
taccggctggagagcacactgaattacggaatggagcgagtgtggtgtgtggccagtctg
agaggctccaacaatgtcgctctgggctacgatgaagggagcatcattgttaagcttggt
cgggaggaacctgccatgtccatggatgccaatggaaagataatctgggccaagcattca
gaggtccagcaggccaacctgaaagcaatgggtgacaccgaaattaaagatggagaaaga
ctgccactagcagtaaaggatatgggcagctgtgaaatatatccacagaccattcagcac
aatcctaatgggaggtttgtcgtggtgtgtggtgatggagaatatatcatctacacagca
atggccttgagaaacaagagctttggatctgcccaggagtttgcatgggcccacgattct
tcagagtatgcaataagagaaagcaacagtgttgtaaagatatttaagaactttaaggaa
aagaaatcatttaaacctgattttggagctgaaagtatctatgggggcttcttgctggga
gtcaggtctgtaaatggcttagcattctatgactgggagaataccgaactcatccgcaga
attgaaattcagcccaagcacatcttctggtctgactctggagagctggtctgtattgcc
accgaggagtcattttttattcttaaatatctgtcagaaaaagtcttggctgcacaggaa
acccacgagggagttactgaggatggcattgaggacgcctttgaggttcttggtgaaatt
caggaaattgtgaaaactgggctgtgggtaggtgactgcttcatctacacaagttctgtg
aacagattaaactattatgtgggaggcgagattgtcaccattgcccacttggacaggaca
atgtaccttctgggctatattccaaaagacaataggctttatctgggagataaagaattg
aacatagttagctactccctgttagtttcagtcctggaataccagactgctgtcatgcgg
agggatttcagcatggctgataaggtgctccctactatccccaaagaacagaggaccaga
gttgcacactttttggaaaagcagggcttcaagcagcaagcactcacagtatccacagat
cctgaacatcgttttgagcttgctcttcaacttggggagctgaaaattgcttaccagtta
gcagtggaggcagagtcggagcagaagtggaaacaacttgccgaacttgccattagtaaa
tgtcagttcagcctagcccaggagtgtttgcaccatgcccaggactacggtggtctgctg
ctcttggccactgcctctggaaacgctagtatggtgaacaagctggcagaaggtgcggag
agagatggcaaaaataacgtggcattcatgagctattttttacagggcaagcttgatgct
tgcctagagctcttgatcagaacaggaagactcccagaagccgccttcctggcccgaact
tacttacccagccaggtctcaagggtagtgaagttgtggagggagaatctctcaaaagtc
aaccagaaagcagcagaatccctcgctgaccccacagagtatgaaaaccttttccctgga
ttaaaagaagcctttgttgttgaagaatgggtgaaggagacacatgcggatctgtggcca
gccaagcagtaccctcttgtcacgccaaatgaagagagaaatgttatggaagaggcaaaa
ggctttcagccctcaagagccacagctcagcaggaacctgatgggaaacctgcttctagc
ccagttatcatggcctcccaaaccactcacaaagaagaaaagagtttccaggaactagaa
gatgatttagataccatggaattagaggatattgatacaacagacatcaatctggatgaa
gatattctggatgactaa

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