Rattus norvegicus (rat): 63881
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Entry
63881 CDS
T01003
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X25
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04015
Rap1 signaling pathway
rno04510
Focal adhesion
rno04722
Neurotrophin signaling pathway
rno04910
Insulin signaling pathway
rno05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
63881 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
63881 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
63881 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
63881 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
63881 (Rapgef1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
63881
NCBI-ProteinID:
XP_006233964
RGD:
619793
Ensembl:
ENSRNOG00000014316
LinkDB
All DBs
Position
3:33296211..33414119
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AA seq
1084 aa
AA seq
DB search
MGNAIEKQKPLRQSHLCPWKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSKT
PEKPVSKEARDRFLPEGYPIPLDLEQQAVEFMSTSAVDSRSQRQKNLCWLEEKEKEVVSA
LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQHSSALSSCYSRVYQSLA
NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSS
PASKPDGQPELPLTEREMEILNKTSVSPSTELLPDSTSEEVAPPKPPLPGIRVVDNSPPA
LPPKKRQSAPSPTRVAVVAPMSRAVSGSSLPVGINRQDFDVECYTQRRLSGGSRSCGGES
PRLSPCSSTGKLSRSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQTPP
QAACNLSPLPESMGESGPPFVGYSFQLPLGSCLQQDGQQTDTPPALPEKKRRSAVSQTTD
SSGCRVSYERHPSQYDNISEDDLQNPAQPVSYPPFAAILPFQQGASSTPVEFVGDFSVPE
SAGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQSEHIYQQKNKMLMEVYGF
SDSFCGSDSTQELAPPPALPPKQRQLEPPSGKDGHPRDLSVSSASGKDSRENGERSPKSL
DALESAQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLV
LYCEAFLTTYRTFISPEELIKKLQCRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVE
LTEEILKLLMELVFRLVCSGELSLARVLRKNILDKVDQKKLLRCAHSDQPLAARGVAARP
GTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWV
RSVIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQRQTSEG
LAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRW
QQFNILDSMRCFQQVHYEIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDR
EEKT
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgccattgaaaaacagaagcccctgagacaaagccatctgtgcccctggaaa
caagactctcagcgctctcatctctcctccttcaccatgaagctgatggacaaattccac
tctcctaaaatcaagagaacaccatccaagaagggaaagccagctgaggtgtcgaagact
cctgagaagcctgtgagcaaagaggcaagagacagatttctaccagagggctaccctatc
cccttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggattccagg
tctcagaggcagaagaacctgtgctggctggaggagaaagagaaggaggttgtcagtgcc
ttgcgctactttaagaccattgtggacaaaatggccattgataagaaggttctggagatg
ctcccggggtcagccagcaaggtgctggaggccatcttacccctggtgcagactgaccct
cggatccagcacagctcagccctctcctcttgctatagccgagtgtaccagagccttgcc
aaccttatccgctggtctgaccaggtgatgctcgagggtgtgaactcagaagataaggag
atggtgacgactgtgaagggtgtcatcaaagctgtgctggatggagtgaaggaactggtg
aggctaaccattgagaagcaaggccggccatcaccaacaagcccagtgaagcccagttcc
ccagccagcaagcctgatggccagcctgagctccctctgacagaacgagaaatggagatt
ctgaacaagacaagtgtgtcaccatccactgaactgctcccagactccaccagtgaagag
gttgcgccccccaagccccctttacctggcatccgggtggttgataacagtccaccagca
ttaccacccaagaaaaggcaatctgctccatcccctacccgggtggctgtggtagccccc
atgagtcgtgctgtcagtggctccagtttgcctgttggaatcaataggcaggactttgat
gttgaatgttacacccagaggcgcctgtcaggaggcagccgctcctgtggtggtgaatct
cctcgcctgtccccctgcagcagtacaggcaagctcagccggtcagacgagcagctgtcc
tccctagacagggatagcgggcagtgctcacggaacacaagctgtgaaacactagatcac
tatgaccccgactatgaattcctccagcaagacctctccaatgcagaccagacccctcca
caggcagcctgtaacctcagcccactgccggagtccatgggggagtctgggcccccattt
gttggctactctttccagctgcctctgggcagctgtctccagcaggatggacagcagaca
gatactccacctgcccttcctgagaagaagcgtaggagcgcagtctcccagaccacggac
agctctggctgcagggtgtcctatgagcgacacccctcacagtatgacaacatctcagaa
gatgatctgcagaacccagcccagcctgtgtcctacccgccctttgctgctatcctgccc
tttcagcagggagcttcttccacccctgttgagtttgtgggtgatttcagtgttcctgag
tcagccggtgacccagaaaagccacctcctctaccagagaagaaaaacaaacacatgctg
gcctacatgcaactgctggaggactactcagagccacagccctccatgttctaccagaca
ccgcagagtgagcacatctaccagcagaagaacaagatgctcatggaggtctatggcttc
agcgactccttctgtggtagtgactccacgcaggagctggcccctccacccgctttgccc
cccaagcagcggcagctggaaccgccatctgggaaggacggacatcccagagatctttcg
gtcagcagtgcatctgggaaggacagcagagaaaatggggagaggtccccgaagtcactg
gatgctctggagtcagcccagtcagaagaggaagtggatgaactgtccctcattgaccac
aatgaaatcatggccaggctgacactcaagcaagagggtgatgatggaccagatgttcgt
ggaggttcaggagacatcttactggtccatgctactgagacagacagaaaagacctggtc
ctgtactgtgaagccttcctgaccacctacagaaccttcatcagccccgaggagctcatc
aagaagctgcagtgccggtacgagaagttctctccctttgctgacacattcaagaagcga
gtgagcaagaacacattcttcgtgctggtgcgggtggtggacgagctctgcctggtggag
ctgacagaggagatcctgaagctgctgatggagctagtcttccgcctagtgtgcagtgga
gagctcagcttggccagggtactccgaaagaacattctggacaaggtggaccagaagaag
ctgctcaggtgtgcccattccgaccagcctttggcagccaggggtgttgcagccaggcca
ggaaccttgcatgatttccacagccacgagatagctgaacagctgacactgctggatgcc
gagcttttctataagatagagattcccgaagttttgctttgggccaaagagcagaatgaa
gagaagagccccaatctgacccagttcacagagcacttcaacaacatgtcctactgggtg
cggtccgtcatcatgctgcaggagaaggcccaggaccgggagaggctgctcctgaagttc
atcaagatcatgaagcacctgcgcaagctcaacaatttcaactcctacctggccatcctc
tccgcactggactcggcccccatccgcagactggagtggcagcgacagacctcagagggc
ctggctgagtactgcacgttgattgacagctcatcctccttccgagcctaccgggctgcc
ctctcagaggtggaacctccatgtatcccatacctaggtttgatcctgcaagacctgacg
ttcgtccacctgggaaacccagactacatagacgggaaggtcaacttctccaagcggtgg
cagcagttcaacatcctggacagcatgcgctgtttccagcaggtgcactatgaaatccgg
agaaacgacgacatcataaacttcttcaatgacttcagcgaccacctggccgaggaagcc
ctatgggaactctctctgaagatcaagcctaggaacataacaaggcggaaaacagaccgt
gaagagaagacctag
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integrated database retrieval system
