Rattus norvegicus (rat): 64159
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Entry
64159 CDS
T01003
Symbol
Sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04210
Apoptosis
rno04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
64159 (Sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
64159 (Sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
64159 (Sptan1)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
64159 (Sptan1)
Intermediate filaments
Intermediate filament-binding proteins
64159 (Sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Tetrabrachion
Motif
Other DBs
NCBI-GeneID:
64159
NCBI-ProteinID:
NP_741984
RGD:
621714
Ensembl:
ENSRNOG00000015396
UniProt:
P16086
Structure
PDB
LinkDB
All DBs
Position
3:33639020..33703890
Genome browser
AA seq
2472 aa
AA seq
DB search
MDPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWI
QEKLQVASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETI
RTRLMELHRQWELLLEKMREKGIKLLQAQKLVQYLRECEDVMDWINDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAAKLIQEQHPEEELIKTKQEEVNAAWQRL
KGLALQRQGKLFGAAEVQRFNRDVDETIGWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVKALCAEADRLQQSHPLSANQIQVKREELITNWEQIRTLAAERHARLDDS
YRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSA
DESGQALLAAGHYASDEVREKLSILSEERAALLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
MEDVATRRDALLSRRNALHERAMHRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYAKEEVAARMNEVISLW
KKLLEATELKGVKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKL
ADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRI
KAVTQKGNAMVEEGHFAAEDVKAKLSELNQKWEALKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQSCRQQV
APMDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPAQSASRENLLEEQGSIALRQGQIDNQTRITKEAGSVSLRMKQVEELYQSLLELG
EKRKGMLEKSCKKFMLFREANELQQWINEKEAALTSEEVGADLEQVEVLQKKFDDFQKDL
KANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVYGMMPRDEADSKTASPWKSARLMVH
TVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDN
YGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAQRLIQSHPESAEDLKEKCTELNQA
WTSLGKRADQRKAKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLER
HQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMM
LDHCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEK
IAALQAFADQLIAVDHYAKGDIANRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDV
DEIEAWISEKLQTASDESYKDPTNIQSKHQKHQAFEAELHANADRIRGVIDMGNSLIERG
ACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEAL
LASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKEKRD
TINGRFQKIKSMATSRRAKLSESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQ
NLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGQEEIQQRLAQFVEHWKELKQLAA
ARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFT
VHKDRVNDVCTNGQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQ
FNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIANITALK
DQLLAAKHIQSKAIEARHASLMKRWTQLLANSATRKKKLLEAQSHFRKVEDLFLTFAKKA
SAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAELDRQIKSF
RVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQW
IQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDN
KYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKS
GRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGHVSLQEYMAFMISRET
ENVKSSEEIESAFRALSSEGKPYVTKEELYQNLTREQADYCVSHMKPYVDGKGRELPTAF
DYVEFTRSLFVN
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagtggggtcaaagtgctggaaacagccgaggacatccaggagagacgacag
caggttctggatcggtaccaccgcttcaaggagctctctaccttgcggcggcagaaactg
gaggattcctatcgcttccagttttttcagagagatgctgaggagctggagaagtggatt
caggagaagcttcaagttgcctctgatgagaactacaaagaccccaccaacttgcaggga
aagctccagaaacaccaagcctttgaagctgaagtacaggccaactcaggagccattgtg
aagctggatgagacaggaaacttgatgatttctgaagggcactttgcatctgagaccatc
cggacacgtttaatggagctgcaccgccagtgggagttgcttttggagaagatgcgggag
aaaggaatcaaactgctgcaggcacagaagctggtgcagtatttgcgggagtgtgaggat
gtaatggactggatcaatgacaaggaagcaattgtgacgtctgaggagctgggccaggat
ttggagcatgtagaggtactacagaagaagtttgaagagtttcaaactgatctggctgct
catgaagaaagagttaatgaagtaaaccagtttgctgccaaacttatccaggagcagcac
ccggaagaggagctgatcaagaccaagcaggaggaggtgaatgcagcttggcagcgactg
aaaggcctggctcttcaaaggcaggggaagctctttggtgctgccgaggttcagcgcttt
aacagggatgtagatgagaccattggttggattaaggagaaagagcagttaatggcctct
gatgactttggcagagacttagcaagtgttcaagctctgcttcggaagcatgagggtctg
gagagagatcttgctgctctagaggacaaggtgaaagccctgtgtgccgaggctgaccgc
ctgcaacagtcacaccctctgagtgccaaccagatccaggtgaagcgagaggaactaatt
accaactgggagcagatccgaactctggccgcagagagacatgcacggcttgatgactca
tacaggcttcagcgctttcttgctgacttccgtgacctcacgagctgggtgactgaaatg
aaagccctcatcaatgcagatgaactggccaatgacgtggctggtgctgaggccctgctg
gacaggcatcaagagcacaagggtgaaatcgatgctcatgaagatagctttaagtctgca
gatgagtctgggcaggccctactcgctgctggtcactatgcctcagatgaagtgagggag
aagctgagcatcctctctgaggagagagctgccctgctggagctgtgggagcttcggagg
caacagtatgagcagtgcatggacttgcagctcttctaccgagacactgagcaggtggac
aactggatgagcaaacaggaggcattcctgctaaatgaagatttgggtgactccttagac
agtgtggaagctcttttgaagaagcatgaggactttgagaaatctctcagtgcccaggaa
gaaaaaatcacagcacttgatgagtttgcaaccaagcttattcagaacaaccactacgca
atggaagatgtagccactcgacgagatgctctcctgagccgccgcaatgccctccatgag
cgagccatgcatcgccgggcacagctggccgattccttccacctgcagcagttcttccgc
gattccgatgagctcaaaagttgggtcaatgagaagatgaaaacggccactgatgaagct
tacaaagatccgtccaacctgcaagggaaagtccaaaagcaccaggcttttgaggctgag
ctctcagccaaccagagccgtattgatgccctagagaaagctgggcaaaaactaatagat
gtgaaccactatgccaaggaagaagtagcagctcggatgaatgaggtcatcagtttgtgg
aagaaacttctagaggccacagaactgaaaggagtcaagctccgagaagccaaccagcag
caacaatttaatcgaaatgttgaggacattgagttgtggctgtatgaagttgaaggtcac
ttggcttcagatgattatggtaaagacctcactaatgtccagaacctccagaagaagcat
gctctgctagaggcagatgttgctgctcaccaggatcgaattgacggcatcacaattcag
gcccgccagttccaagatgctggccatttcgatgccgaaaacattaaaaagaagcaagag
gcccttgtagctcgctatgaggctctcaaggaacccatggtggcccggaagcagaagctg
gcagattctcttcgtctgcagcagctcttccgagatgtggaggatgaggaaacctggatt
cgagaaaaggagcctattgctgcgtccactaacagaggcaaagatcttattggagtccag
aatctgctaaagaagcaccaagctttacaggcagaaattgctggccatgaacctcgcatc
aaagcagtgacacaaaagggcaatgccatggtggaggaaggccattttgctgctgaggat
gtgaaggccaaactgagtgagctcaaccagaagtgggaggcactgaaagccaaagcctcc
cagcggaggcaggatctggaggactcactacaggcccagcagtactttgccgacgccaat
gaagctgagtcctggatgcgggagaaggagcccattgtgggcagtaccgactatgggaag
gatgaagactctgctgaggctctgctcaagaagcatgaagctttgatgtccgatctcagt
gcctacggcagcagcattcaagctttgcgagagcaggctcagtcatgccggcaacaagtg
gcccccatggatgatgagactggcaaggagctggtcttggctctctatgactatcaagag
aagagccctcgtgaggtcaccatgaagaaaggggatatcctcaccttgctcaacagcaca
aacaaggactggtggaaagtggaagtgaatgaccgtcagggttttgtgccagctgcgtat
gtgaagaagctggaccccgcccagtcagcctcaagggagaacctcctggaagaacagggc
agcattgctctgcggcaggggcagatcgacaaccagacacgcataactaaggaggccggc
agtgtatctctgcgtatgaaacaggtggaagaactgtatcagtctctgctggagctgggt
gagaagagaaaaggcatgttggagaagagttgcaagaagttcatgttgttccgggaagcg
aacgagctacagcagtggatcaacgagaaggaagctgctctaacgagtgaagaggttggc
gctgacttggagcaggtcgaggtgctgcagaagaagttcgatgacttccagaaggatctg
aaagccaatgagtcccggctgaaggacattaacaaagtggccgaggacctggagtctgaa
ggtctcatggcggaagaagtgcaggccgtgcagcagcaggaggtgtatggtatgatgccc
agggatgaagcagattccaagaccgcctccccatggaagtctgctcgactgatggtccac
acagtggccaccttcaactccatcaaggagctgaatgagcgctggcggtccctgcaacag
ctggctgaggaacgtagccagctcctgggcagtgcacacgaagtacagaggttccacagg
gatgcggatgaaaccaaagaatggattgaggagaagaaccaggctctgaacacagacaac
tatggccatgatctagctagcgtccaggccctgcagcgcaaacacgaaggcttcgagagg
gaccttgcagctcttggtgacaaggtgaattcccttggggaaacagcccagaggctgatc
cagtcccaccctgaatctgcagaggacttaaaggaaaagtgcacagagttaaaccaggcc
tggaccagcctagggaagcgtgcagaccagcgcaaggccaaactgggtgactcccatgac
ctgcagcgcttccttagcgatttccgggacctcatgtcttggatcaatggaatacgaggg
ttggtatcttcagatgaactggccaaggatgtcactggagctgaggctttgctggagcga
caccaggaacaccggacagaaattgatgccagggctggcactttccaggcatttgagcag
tttgggcagcagctgttggctcatgggcactatgccagcccagagatcaaggagaaactt
gatattcttgaccaggagcgcacagacctggagaaggcctgggttcagcgcagaatgatg
ctggaccactgcctggagttgcagctgttccatcgagactgtgagcaagcagagaactgg
atggctgcccgggaagccttcctaaacacagaagacaaaggagactcgctggacagtgtg
gaggctctgatcaaaaaacatgaagacttcgacaaagctatcaatgtccaggaggagaag
atagctgccctgcaggcctttgccgaccagctcattgctgtggaccactatgccaaggga
gacattgcaaaccgacgcaatgaggtcctggacaggtggcgccgcctaaaagcccagatg
attgagaaaaggtcaaagctcggagaatctcaaacacttcagcagttcagccgggatgta
gatgagattgaagcctggatcagtgagaagttacaaacagccagcgatgagtcatacaag
gaccccaccaacatccagagcaagcaccagaagcaccaagcctttgaggcagaactgcac
gccaatgctgaccgaatccgtggagttattgacatgggcaactccctcattgagcgtggg
gcctgtgctggcagtgaggatgctgtcaaggcccgcctggctgcccttgcagaccagtgg
cagttcctggtgcagaagtcagctgagaagagccagaagctgaaagaggccaataagcag
cagaacttcaacaccgggatcaaagactttgacttctggctttctgaggtggaggctctc
ctggcatctgaagactacggcaaagacctggcttccgtgaacaacctgctcaaaaagcat
cagctgctggaggcagacatatcggcccacgaggatcgtctgaaggacctgaacagccag
gctgacagcctgatgactagcagtgccttcgacacctcccaagtgaaagagaagcgggac
accatcaatggacgctttcagaagatcaagagcatggcaacctcccgaagagcaaaactg
agcgagtcccatcgcctgcaccagtttttccgagacatggatgacgaggagtcctggatc
aaggagaagaagttgttagtgagctctgaggactatggcagagacctcactggtgttcaa
aatctgaggaagaaacacaagcggctagaagccgaactggccgcacacgaaccagccatt
cagggtgtcctggacacggggaagaagctgtctgatgacaacaccatcgggcaggaggag
atccagcagcgtctcgcacagtttgtggagcactggaaggaactgaaacagctagcagct
gcacggggccagcggctggaggagtccttggagtatcagcagtttgtggccaacgtggag
gaggaggaggcttggatcaatgagaagatgaccctggtggccagcgaagactacggggac
actcttgctgccatccagggcttactgaagaaacatgaagcttttgagacagacttcact
gtccacaaggatcgagtgaatgatgtctgtactaatggacaagacctcattaagaagaac
aatcaccatgaggagaacatctcttcaaagatgaagggtctgaatggtaaagtgtctgac
ctggagaaagcagcagctcagaggaaagcgaagctggatgagaactcggccttccttcag
ttcaattggaaggctgacgtggtggagtcctggattggtgaaaaggagaacagcttgaaa
acagatgattatggccgagatctgtcttctgtccaaactctgctcaccaagcaggagaca
tttgatgctggcctgcaggccttccagcaggagggcattgccaatatcactgccctcaaa
gaccagctgctagctgccaagcacattcagtcgaaggccatcgaggcccgacatgcctcc
ctcatgaagaggtggacccagctgttggccaattcagctacccgcaagaagaagttgcta
gaggcccagagtcatttccgaaaggtagaagacctcttcctgacctttgccaaaaaggca
tcggctttcaacagctggtttgagaatgcagaagaggacctcacagacccagtgcgctgc
aactctctggaagaaatcaaagccctccgagaggctcatgatgccttccgctcatcgctc
agctctgcgcaggccgacttcaaccagctagccgagctggaccgtcagatcaagagtttc
cgagtggcctccaatccctacacctggttcaccatggaggccctggaagagacgtggagg
aacctacagaagatcattaaggagcgagaactggagctgcagaaggaacagcggcggcag
gaggagaatgacaagctacgccaagagtttgcccagcatgccaacgcgttccaccagtgg
atccaggaaacaagaacgtatctcctcgacgggtcctgcatggtcgaagagtcgggaact
ctggaatctcagcttgaagctaccaaacgcaagcaccaggagattcgggccatgagaagt
cagctgaagaagattgaggacctgggggctgccatggaggaagccctcatcctggacaac
aagtacactgagcacagcactgtgggcctggcccagcagtgggaccagttagaccagctg
ggcatgcgcatgcagcacaacctggagcagcagatccaggccaggaacacaacaggagtc
actgaggaggccctcaaggagttcagcatgatgttcaaacacttcgacaaggacaagtct
ggccggctgaatcatcaagagttcaaatcctgccttcgttctctgggttacgacctgcca
atggttgaggaaggagagcctgatcctgagtttgaggccatactggacactgttgatccc
aacagggacggccacgtctccctgcaagagtacatggctttcatgatcagccgtgaaacc
gagaatgtcaagtccagtgaagagatcgagagtgctttccgggccctcagctccgagggc
aagccttatgtgaccaaggaggagctctaccagaacctgacccgggaacaagctgactac
tgtgtctcccacatgaagccctatgtggatggcaagggccgcgaacttccaactgccttc
gactacgtggagttcacccgctctctctttgtgaattga
DBGET
integrated database retrieval system