Rattus norvegicus (rat): 64301
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Entry
64301 CDS
T01003
Symbol
Smn1
Name
(RefSeq) survival motor neuron protein
KO
K13129
survival motor neuron protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
64301 (Smn1)
Spliceosome [BR:
rno03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
64301 (Smn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_Tudor
SMN_YG-box
SMN_G2-BD
TUDOR
Motif
Other DBs
NCBI-GeneID:
64301
NCBI-ProteinID:
NP_071954
RGD:
620755
Ensembl:
ENSRNOG00000018067
Vega:
OTTRNOG00000001091
UniProt:
O35876
Q6P684
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All DBs
Position
2:33224115..33235162
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AA seq
288 aa
AA seq
DB search
MAMGSGGAGSEQEDTVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDMCETS
DKPKGTARRKPAKKNKNQKKNATAPLKQWKAGDKCSAVWSEDGCVYPATITSVDLKRETC
VVVYTGYGNKEEQNLSDLLSPTCEVANNTEQNTQENESQVSTDDSEHSSRSLRSKAHSKS
KAAPWTSFLPPPPPVPGAGLGPGKPGLRFNGPPPPPPPPPPFLPCWMPPFPSGPPIIPPP
PPISPDCLDDTDALGSMLISWYMSGYHTGYYMGFRQNKKEGKKCSHTN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgggcagcggcggcgcgggctctgagcaggaagacaccgtgctgttccggcgt
ggcaccggccagagtgatgattctgacatttgggatgatacagcattgataaaagcttac
gataaagccgtggcttcctttaagcatgctctaaagaacggtgacatgtgtgaaacttca
gataagccaaaaggcacagctagaagaaaacctgctaagaagaataaaaaccaaaagaag
aatgccacagctccattgaaacagtggaaagctggtgacaaatgctctgccgtttggtcg
gaagatggctgcgtttacccagctaccatcacgtcagttgaccttaagagagaaacctgt
gtcgtggtttatactggatatggaaacaaagaggagcaaaacctatctgatctgctttcc
ccgacctgtgaagtagctaacaatacagaacagaacactcaggagaatgaaagccaagtt
tccacagacgacagtgaacactcctccagatcgctcagaagtaaagcacacagcaagtcc
aaagctgctccatggacctcgtttctccctccacctcccccggtgcccggggcgggatta
ggaccaggaaagccaggtctaaggttcaatggcccaccgccgccgccacctccccctccc
ccgttcttgccgtgttggatgcctccgttcccttcaggaccaccaataattcctccaccc
cctcccatatctcccgactgtctggatgacacggatgctctgggcagtatgctaatctct
tggtacatgagtggttaccacactggttactatatgggtttcagacaaaataaaaaagaa
ggaaagaagtgctcacatacaaattaa
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