Rattus norvegicus (rat): 64345
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Entry
64345 CDS
T01003
Symbol
Hif3a
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform 1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
64345 (Hif3a)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
64345 (Hif3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_4
PAS_9
HLH
PAS_2
ATPase
Motif
Other DBs
NCBI-GeneID:
64345
NCBI-ProteinID:
NP_071973
RGD:
70332
Ensembl:
ENSRNOG00000017198
UniProt:
Q9JHS2
F1LRL5
LinkDB
All DBs
Position
1:complement(86846196..86878527)
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AA seq
662 aa
AA seq
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MDWDQDRSSTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLTIS
YLRMHRLCAAGEWNQVGKEGEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQL
ELIGHSIFDFIHPCDQEELQDALTPRPSLSKKKSEAATGRHFSLRMKSTLTSRGRTLNLK
AATWKVLHCSGHMRAYKPPAQTSPAGSPRSEPPLQCLVLICEAIPHPASLEPPLGRGAFL
SRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTG
QYRFLARTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRVEENGVVLSLEQTEQHTRR
PPQLGTSSKKGIPGNSLDPPAPRILAFLHPPALSEASLAADPRRFCSPDLRRLMAPILDG
PPTAATPSTPQAARRPQSPLPADLPDQLAVGLENAHRLSTARKNKTMETDLDIAQDPDTL
DLEMLAPYISMDDDFQLNSSEQLPKVHRRPPRTARRPRARSFHGLSPPIPEATLLPRWGS
DPRLNCSSSSKGDPPTAPLTPRTRKRALAQSSEDKGLELLETKPPKRSPRLEPGSVLLPP
LSLSFLLQGRQLPGNQPDPRAPLVDSHEPLGLAPSLLSLYQHEETIQPRNHFLPAAGLAQ
TH
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggactgggaccaagacaggtcgagcaccgagctgcggaaggagaagtcgcgggatgcg
gcccgcagcaggcgcagccaggagacggaggtgctgtaccaactggcgcacaccctgccc
tttgcgcgcggcgtcagcgcgcacctggacaaggcctccatcatgcgcctcacaatcagc
tacttgcgcatgcaccgcctctgcgctgcaggggagtggaaccaggtgggaaaagaggga
gaaccactggacgcctgctacctgaaggccctggagggtttcgtcatggtgctcaccgct
gagggagacatggcttacctgtcggaaaatgtcagcaagcacctgggcctcagtcagctg
gagctcattggacacagtatctttgattttatccatccctgtgaccaagaggaactccag
gatgccctgaccccgagaccaagcctgtcaaagaagaagtcagaagcagcaacaggacgc
cacttttccctgcgaatgaagagcacactcaccagcagggggcgcacgctgaacctcaaa
gcggccacctggaaggtgctgcactgctcaggacatatgagggcctacaagccccctgca
cagacttcccccgccgggagccctcgctccgagcctcccctgcaatgcctggtgcttatc
tgtgaagccatcccccacccagccagtctggagcccccactgggccgaggggcctttctc
agtcgccacagcctggacatgaagttcacatactgcgacgagaggattgcagaagttgct
ggctacagccccgatgacctgattggctgttctgcctatgaatacatccacgctttggac
tctgatgcagtcagcaggagcatccacactttgctgagcaagggccaggcagtaacaggg
cagtatcgcttcctggcccggactggaggctatctgtggactcagactcaggctacagtg
gtgtcaggggggcggggcccccagtcggaaagtatcatctgcgtccacttcctgatcagc
cgtgtagaagagaacggagtggtgctgtccctggaacaaacggagcaacatactcgcaga
ccccctcagctgggtacctcctcgaagaagggtatcccaggcaacagtctagaccctccc
gctccacggatcctggccttcctgcaccctccagccctgagtgaggcctccctggctgct
gaccctcgccgtttttgtagcccagacctgcgccgcctcatggcacccatcctggatgga
cctcccacagccgctacccccagcaccccgcaagctgcacggagaccccaaagtcctctt
ccggctgatctcccagatcagttggctgtgggcttggagaatgcacacagactctccact
gcccggaaaaacaagaccatggagacagatctagatatagctcaggaccctgacactctg
gacttggagatgttggctccgtacatctccatggatgatgacttccagctcaactccagc
gagcaattgcccaaagtccaccgcagacctcccaggacggcccgcaggcctcgtgctcgg
agcttccatggcctgtcgcctcccatccctgaggccaccctgctgccccgctgggggagt
gatccacgactgaactgttccagctcctccaagggggatccccccacagcccccctgacg
cctagaactcggaagagggccttggcccagagctcagaggacaaagggttggagctgctg
gaaacgaagccccccaagcggtccccaagactagaacctggaagtgtcctgctgcctccg
ctcagcctgagtttccttctgcaaggtcgacaacttccagggaaccagccggatcccaga
gccccactcgtggattcgcatgagcccttgggcctagctccctcgctgctctctctctac
cagcatgaggaaactatccagcccaggaaccacttcctcccagcagcaggcttggcccag
acacactga
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integrated database retrieval system
