Rattus norvegicus (rat): 65081
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Entry
65081 CDS
T01003
Symbol
Vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04140
Autophagy - animal
rno04148
Efferocytosis
rno05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
65081 (Vps33a)
04148 Efferocytosis
65081 (Vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
65081 (Vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
65081 (Vps33a)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
65081 (Vps33a)
Hops complex
65081 (Vps33a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
65081
NCBI-ProteinID:
NP_075250
RGD:
620643
Ensembl:
ENSRNOG00000056889
UniProt:
A0A9K3Y802
Q3KRF0
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All DBs
Position
12:38685484..38710668
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AA seq
597 aa
AA seq
DB search
MAAHLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGSRLPAADVKNIIFLVRPRLELMDMIAENVLSEDRRGPTRDFHILFVPRRSLL
CEQRLKDLGVLGSFIYREEYSLDLIPFDGDLLSMESESAFKECYLEGDQTSLYHAAKGLM
TLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSVFPVFDNLLLLDRNVDLLTPL
ASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGGGKDLPTEAKKLQLNSAEELYAEI
RDKNFNAVGSVLSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAE
LIKDVTTSEDFFDKLTVEQEFMSGIDTDKVNNYIEDCIAQKHPLIKVLRLVCLQSVCNSG
LKQKVLDYYKREILQTYGYEHILTLNNLEKAGLLKAQTGGRNNYPTIRKTLRLWMDDVNE
QNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPLPTGLQKKRQP
GENRVTLVFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLINGSSWLEALMEKPF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcacctgtcatacgggcgagtgaacctgaacgtgctgcgcgaggcggtgcgt
cgggagctgcgcgagtttctggacaagtgcgctgggagcaaggcaatagtgtgggatgaa
tacttaacaggaccgtttggactgattgcacagtactcactactaaaggaacatgaagtg
gaaaaaatgttcaccctcaaaggaagtcgtttgccagcggctgatgtcaagaatatcatt
tttttggtcagacccaggctagaattaatggatatgattgccgagaacgtactcagtgag
gacaggcgtggccctaccagggatttccatattttgtttgtgcctcgtcggagcctactg
tgtgagcaaaggctgaaggacctgggtgtgttgggatcctttatttatcgagaggagtac
agtttagatctcattccatttgatggggacctcttatccatggagtcagagagcgctttc
aaagaatgctaccttgaaggcgaccagacaagcctgtaccacgcagccaaggggctgatg
accctgcaggcgctgtatggaactatcccccagatctttgggaaaggagagtgtgctcgg
caagtggccaatatgatggtcaggatgaaaagggagtttacaggcagccaaaactcagtg
ttccccgtgtttgataacctcttactgcttgatcgcaacgtggatctgctgacgccgctc
gcctcccagctcacgtacgaaggactcatcgacgagatttacggcattcagaacagttat
gtgaagttacctccagagaaatttgcacccaagaagcagggcggtggtggcgggaaggac
cttcccacagaggcaaagaagcttcagctcaactccgcagaggaactctatgccgagatc
cgagacaagaacttcaacgctgtgggctccgtgctcagcaagaaggcgaagatcatctcc
gcggcctttgaggagcgacacaatgctaagacggttggagagatcaagcaattcgtctcc
cagcttccccacatgcaggcggccagggggtcgcttgccaaccacacctcaattgcagag
ttaatcaaagacgtcaccacttctgaagacttctttgataagttgacggtggagcaggag
ttcatgtccgggatagacaccgataaggtcaacaattacatcgaggactgcattgcccaa
aagcacccgctcatcaaggtcctgagattggtttgcctccagtctgtgtgcaacagtggg
ctcaagcagaaggttctggactactacaaaagggaaattctccagacctacggctatgag
cacatactgaccctgaacaacctggagaaggccggcctgctaaaggctcagacagggggc
agaaacaactacccaacgattcggaaaacattacgcctctggatggacgatgtcaatgaa
caaaaccccacagacatatcctacgtgtacagtggttacgcaccactcagcgtgcgactc
gcccagctcctttctcggccaggttggaggagcatcgaggaggttctccgcattctccca
gggccccactttgaagaaaggcagccactgcccaccgggctgcagaagaaacgccagcca
ggagaaaacagagtcacactggtgtttttcctcgggggcgtcacctttgctgaaatcgca
gccctgcgttttctctcccagctggaagacggaggcacagagtatgtaattgcgaccact
aaactgataaatggaagcagctggctagaagctctcatggaaaagcctttctag
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