Rattus norvegicus (rat): 65277
Help
Entry
65277 CDS
T01003
Symbol
Vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
65277 (Vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
65277 (Vti1a)
Membrane trafficking [BR:
rno04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
65277 (Vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Sec20
Laminin_II
Peptidase_S46
Mer2
Fusion_gly
DUF5344
FapA
Exonuc_VII_L
SKA2
Orf78
Motif
Other DBs
NCBI-GeneID:
65277
NCBI-ProteinID:
NP_075589
RGD:
621490
Ensembl:
ENSRNOG00000042786
UniProt:
Q9JI51
A6JHZ7
Structure
PDB
LinkDB
All DBs
Position
1:264361538..264667171
Genome browser
AA seq
217 aa
AA seq
DB search
MSADFEGYEQDFAVLTAEITSKISRVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDAGNSSENQRAHLLD
NTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDRERIQRARERLRETDANLGKSSRI
LTGMLRRIIQNRILLVILGIIVVITILTAITFFVRGH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgacttcgaagggtacgagcaggacttcgcagtgctcactgctgagatcacc
agcaagatttccagggtccctcgactccctcccgatgagaagaagcaaatggttgccaac
gtggagaaacagctcgaagaggccagagaactgctcgaacagatggacttggaagttcga
gaaatcccaccccaaagtcgaggaatgtacagcaacagaatgaggagctacaagcaagaa
atggggaaactggaaacggattttaaaaggtcacggatcgcctacagtgacgaagtacgg
aatgagctcctaggggatgctgggaattcctcagagaaccagagggcacatctgctggat
aacacggaaaggctggagaggtcatctcggagactagaggctggataccagatagcagtg
gagaccgagcaaatcggccaagagatgttggaaaacctgagtcatgacagagagaggata
cagcgggcacgtgagcgactccgggaaacagatgcaaacttggggaagagctctcggatt
ctgactgggatgttgcgaagaatcatccaaaaccgcatcctgctcgtcatcctggggatc
atcgtggtcatcaccatcctgacggccatcactttttttgtcagaggacactga
DBGET
integrated database retrieval system