Rattus norvegicus (rat): 66014
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Entry
66014 CDS
T01003
Symbol
Impg1
Name
(RefSeq) interphotoreceptor matrix proteoglycan 1 precursor
KO
K19016
interphotoreceptor matrix proteoglycan 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rno00536
]
66014 (Impg1)
Glycosaminoglycan binding proteins [BR:
rno00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
66014 (Impg1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
DUF4214
S_locus_glycop
Motif
Other DBs
NCBI-GeneID:
66014
NCBI-ProteinID:
NP_076448
RGD:
620499
Ensembl:
ENSRNOG00000012479
UniProt:
Q9ET62
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Position
8:complement(90123821..90269903)
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AA seq
797 aa
AA seq
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MNLEIKHAILVLWIFLQVQGIKDTSTKTHSSGTKNIDKAPRIETTESTSAVHKASTMKRL
FAVAKLRNKRSALFPAVNICLRESLRQILESLQEYYRLRVCQEIVWEAYRIFLDRVPDTE
EYQDWVSLCQKETFCLFDIGKNFSNSQEHLDLLQQRIKQRSFSGRKDDMSPIEILGVPTT
APVLPIDVSSMSLRPFPLPPDDTDLKEVTIKDIQTPIAIRRAELESKPEPTHVTEISSEE
KVEFSISLPNHRFKAELTNSRSPYYQELVGQSQLQLQKIFKKLPGFGEIRVLGFRPKKEE
DGSSSTEIQLMAIFKRDHAESKGPESDLLSLDSNKIERERIHHGAIEDKQPEAYLTAADL
KKLIIRLLDGDQPLVGGTVPFSDEVTEPLFRPVTQSELPKPLTDVTEDVTLSPELPFSEP
RLESVDRDGPDLPDSSWSLPVTASTSGVGNLPSFTPSIFALDDQSSPPLMATGPTAFIPT
LTLPTLDYSTVRQWPLEVSHWPESSSDRELTTSSHDTIRDLDEMDVSDTPALSEIAELSG
YDSAPDRFLEMTTPIPTLQYVTTSSETIAAKGHELVVFFSLRVANMPFSYDLFNKSSLEY
QALEQRFTDLLVPYLRSNLTGFKQLEILSFRNGSVIVNSKVRFAKAVPYNLTQAVRGVLE
DLRSTAAQELNLEIESFSLNIEPADQADPCKFLDCGKFAQCIKNELTEEAECRCRQGHES
HGTLEYQELNLCPPGKTCEASQGQATPCRPPDHSTNQARQPSVKKLQRQQNKVVKKRNSE
LSATDFEELDDQDWEGN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggagattaaacatgctatcttggttttgtggatttttctccaagttcaagga
atcaaagatacctctactaaaacacacagttctggaactaaaaacatagacaaagcccca
agaattgaaacaactgaaagcacttcagcagtgcacaaagcgtcaaccatgaaacgactg
ttcgctgtggcaaagcttcgaaacaaaagatcggcactgttcccagctgtgaacatctgt
ctgcgggaatccttgaggcagattttagaaagtcttcaagaatattatcgactgagagta
tgtcaagaaatagtgtgggaagcatatcggatctttctggatcgcgttcctgacacagag
gaatatcaagactgggtcagcctctgccagaaggagaccttctgcctctttgacattggg
aaaaacttcagcaactcccaggagcacctggatcttcttcagcagagaataaaacagaga
agcttctctgggagaaaagatgatatgtcccccatagagatactgggagtgcctaccaca
gcccctgtgttacccatagatgtttccagtatgtcactgaggcccttcccactccctcct
gatgacacagacctcaaggaggtcaccatcaaagacatccagacgcccatagcaataaga
agagctgagttggaaagtaaaccagagcctactcacgtgactgaaatctcatccgaggag
aaagtggagttcagcatctctctgccaaaccacaggttcaaggcagagctcaccaactcc
agatccccatactaccaggaactggtgggacagtcccaactgcagttgcaaaagatattt
aagaaacttccaggattcggagaaatccgcgtgttaggatttagaccaaagaaagaagag
gatggttcaagctccacagaaatacaactcatggccatctttaagagggaccatgcagaa
tcaaaaggccctgagagtgatctcctgtctctcgattccaacaaaattgaacgtgaaaga
atccatcacggagccatagaagacaaacaaccagaagcctacctcacagctgcagacctc
aaaaaactcatcatacgactactagatggagaccagcccttggtaggagggacagttcca
ttcagtgatgaagttactgagccactcttcagacctgtcacccaatcagagctgcccaag
ccccttactgatgtcacagaggatgtcactttgagtccagagcttcctttcagtgaacct
aggcttgagagtgtggacagagatggtcctgacctgcctgacagttcttggtctctgcct
gtaacagcctcgacttccggagtgggaaatctaccttcctttacgcctagcatcttcgct
ctggatgatcaaagctcccctcccttgatggccactggcccaacagcattcatccccacg
ctcactctccccactctcgattattctaccgtccgccaatggccgctagaagtgtcacat
tggcctgagtcttccagtgacagagagttgaccacaagcagccacgacacaatcagagac
ctagatgaaatggatgtgtccgacacgcctgccttgtcggaaatagcagaactgagtgga
tatgactctgccccggatcggtttttggagatgaccacgcccatcccgacattacagtat
gtcaccaccagctctgagaccattgccgccaagggccacgagctagtggtattcttcagt
ctgcgcgtcgctaacatgccgttctcctatgacttgttcaataagagttccctggagtac
caagccttggaacaacgattcacagacctgttggttccatatctacgatcgaatcttacg
ggctttaagcaactggaaatactcagcttcagaaacggaagtgtgatcgtgaacagcaaa
gtgcggttcgccaaggccgtaccctacaacctcacccaggcggtgcgcggggtcttggag
gatcttcggtccactgcagctcaagagctcaacctggaaatcgaaagcttctctctcaac
attgaaccagctgatcaggcagatccctgcaaattcctagactgtggcaaattcgcccag
tgtataaagaatgagttgacagaggaagcagagtgtcgctgcagacagggacatgagagc
cacgggaccctggaataccaggaactgaacctctgtcctcctggaaagacttgtgaagcc
agtcaaggacaagcaaccccatgcaggccaccagatcactctacaaaccaagctcggcaa
cctagtgttaaaaagctacaacgtcagcaaaataaggtggtcaagaaaagaaattctgaa
ctctcagctacagattttgaagaattggatgaccaggattgggagggaaattaa
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