Rattus norvegicus (rat): 678769 Help Entry 678769            CDS       T01003                                  Symbol Atg4a Name (RefSeq) cysteine protease ATG4A   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism rno  Rattus norvegicus (rat) Pathway rno04136   Autophagy - other rno04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:rno00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     678769 (Atg4a)    04136 Autophagy - other     678769 (Atg4a)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:rno01002]     678769 (Atg4a)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rno04131]     678769 (Atg4a)    03029 Mitochondrial biogenesis [BR:rno03029]     678769 (Atg4a) Peptidases and inhibitors [BR:rno01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    678769 (Atg4a) Membrane trafficking [BR:rno04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     678769 (Atg4a) Mitochondrial biogenesis [BR:rno03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     678769 (Atg4a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  678769 NCBI-ProteinID:  NP_001119770 RGD:  1596915 Ensembl:  ENSRNOG00000050960 UniProt:  B1H274 LinkDB All DBs Position X:109453712..109553758 Genome browser AA seq 406 aa AA seqDB search MESVMSKYENQIIIFTEYLEEFPDTDELVWILGKPHLLKTEKSKLLSDISARLWFTYRRK FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWERQKEQPKEYQRILQCFLD RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVIKKLALFDEWNSLAVYVSMDNTVVIE DIKKMCCVLPVGAADTAGESPPDSLIASSQSKGTSAPCLAWKPLLLIVPLRLGINQINPV YIEAFKECFKMPQSLGALGGKPNNAYYFIGSLGDELIFLDPHTTQTFVDTEESGLVDDHT FHCLQSPQRMSILNLDPSVALVGQGAFMGFFCKEEKDFDNWCSLVQKEILKENLRMFELV QKHPSHWPPFVPPAKPEVTTTGAEFIDSTEQLEDFDLEEDFEILSV NT seq 1221 nt NT seq  +upstreamnt  +downstreamnt atggagtcagttatgtccaagtatgaaaaccagattattattttcactgaatacctagaa gaattcccagatacagatgagctagtatggatcctggggaagccacatctccttaagaca gaaaaatctaagctgttgtctgatataagtgctcgtctatggtttacatacagaaggaaa ttttcaccgattgggggaacaggcccttcgtcggatgctggctggggatgtatgctgcgc tgtgggcagatgatgctggctcaagccctcatctgtagacacttgggaagggattggaac tgggagagacaaaaagaacaacccaaagaataccaaaggatactgcagtgtttcctagat agaaaagactgttgctattcaatccatcagatggcacaaatgggtgtaggagaagggaaa tcaattggcgaatggtttggaccaaatacagttgcacaggtgataaaaaaacttgcttta tttgatgaatggaattccttggctgtttatgtttcaatggataacacagtggtcattgaa gatatcaagaaaatgtgctgtgttcttcctgtgggtgctgctgacacagctggtgagagc cctcctgattctctgattgcttccagtcagagtaagggcacctctgccccgtgcctagcc tggaaacccctgctgctcattgtgccccttcgcctgggcataaaccaaatcaaccctgtg tatattgaagcattcaaagagtgttttaagatgccacagtctttaggggctttaggagga aagccaaataacgcctattatttcataggatccttaggtgacgagctcattttcttggat cctcacacaacccagaccttcgttgatactgaagagagtggactagtagacgaccacact ttccattgcctgcagtctccacagcggatgagtatcctgaacttggatccttctgtggcc ttggtgggtcaaggagcttttatgggatttttctgcaaagaagagaaagactttgataat tggtgtagtcttgttcagaaggaaattctaaaggagaatttgaggatgtttgaattagtt cagaaacatccatcacactggcctccctttgtacctccagccaagccagaagtgacaacc acaggggcagaattcatagactctaccgaacaactggaggacttcgacctggaggaagat tttgagattctgagtgtgtag

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