Rattus norvegicus (rat): 679127
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Entry
679127 CDS
T01003
Symbol
Rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rno03009
]
679127 (Rrp12)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
90S particles
Other 90S particles
679127 (Rrp12)
Pre-60S particles
Other pre-60S particles
679127 (Rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
679127
NCBI-ProteinID:
NP_001388156
RGD:
1591867
Ensembl:
ENSRNOG00000048495
LinkDB
All DBs
Position
1:complement(250621707..250655318)
Genome browser
AA seq
1293 aa
AA seq
DB search
MGRSGKLPSGVSAKLKRWKKGHSSDSNPTTCRHRQAARSRFFSRPSGKSDLTVDAVKLHN
ELQSGTLSLGKSQAPETTMDQDPEVAFTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVESPESLAAVAYLLNLVLKRVPS
PVLMKKFSDTSKAFMNIMSAQASSGSTSALRWVLSCLAILLRKQDLEAWGYPITLQVYHG
LLSFTVHAKPKVRKAAQHGVCSVLKGSDFMFGEEAPAHHPAAVSTAKFCIQEIEKSGGSR
EATTTLHMLTLLKDMLPCFPEGLVKSCSETLLRVMTLNHVLVTACAMQAFHNLFHAKPSP
STLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQRDLGLGHLARFFGI
AVTCLLSPHSQVVAAATQTLKEILRECVAPHVADIGSVTSSASGPPQYIAKMFRAVEEGL
TYRFHAAWSSVLQLLGVFFEACGKQAHPVMKKCLQSLCDLRLSPHFPHTAALDQAVGAAV
TSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVRETRLGFFTTYFLPLATALKRK
AMDLAQAGSAVESKIYDTLQWQIWTLLPGFCIRPTDVAASFKGLARTLGTAISERPDLRV
TVCQALRTLITKGCEAEADRAEVSRFAKNFLPILFNLYGQPVAAGEAEAPRRAVLETIKT
YLTITESQLVNGFLEKATEKVLDPASSDFTRLSVLDLVVALAPYSDEAAISKLYSTIRPY
LESKVHGVQKKAYRVLEEVCASSQGPAARFVQSHLDDLKKTLLDSLQSTSSPAKRPRLKC
LIHIVKKLSAEHEEFIAALIPEVILCTKEVSVGARKNAFTLLVEMGHAFLRFDSSQEEAL
QRYLVLIYPGLLGAVTTVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVV
KSALGFIKVAVVVMDVVHLAKHVQLVLEAIGKLSDDMRRHFRMKLRNLFIKFIRKFGFEL
VKDLLPAEYHKVLVNIRKAETRAKKHRALSQAAMEEEEEEEEEKPVQSKGDSIEEILADS
EDEDEEEERSQGKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAHRVLATQPGPGRGKKK
DHGFKLSADGRLIIREEEDGDKVEEEDVTKGEDEEMTDVMEDASVRSKKKLKRQREDEED
ELEIPPRYQAGGSGIHRPVAKKAAPGAEYKAKKAKGDVKRKGRLDPYAYVPLNRTKLNRR
KKVKLQGQFKGLVKAAQRGSQVGHKLHRKDRRP
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgctcggggaaattgccatctggtgtctcggccaagctgaagcgctggaagaaa
ggccacagcagcgacagcaaccccaccacttgccgccatcgccaggccgctcgcagccgc
ttcttcagccgcccatcagggaagagcgacctgacagttgatgccgtgaagttgcataat
gagctgcagtctgggaccttgagcctgggcaaaagccaagcccctgagacgaccatggac
caagacccggaggtggctttcactgagaagtcctcgggcacatttctgagtggcttgtct
gactgtacaaacgtcaccttcagcaaagtgcagcgcttttgggaatccaactcagctgct
cacaaggagatctgtgctgtcctggctgctgtcacggaggtgattcgatcccagggaggc
aaggagacggagactgagtactttgctgctctgatgacaacaatggaagcagtggagtcc
ccagagtcactggctgccgttgcgtacctactgaaccttgtcctgaagcgtgtgccaagt
cccgtgctcatgaagaagttctccgatacctccaaagccttcatgaatatcatgtctgcc
caggcgagcagtggctccacctctgcgctccgatgggtcctctcctgcctggccatcctc
cttcggaagcaagacctagaggcctggggctatcctatcacccttcaggtgtaccatgga
ctgctgagcttcaccgtgcatgccaagccgaaggtccgaaaggctgctcagcatggggtg
tgctcagtccttaagggcagtgactttatgtttggagaagaggcccccgcccatcaccct
gctgcggtctccactgccaagttctgcatccaggagattgagaaatctggaggctccaga
gaggccaccaccacactgcacatgctaacactgctgaaggacatgctgccctgcttcccg
gaaggcctggtgaagagctgcagtgagactctgcttagggtcatgaccttgaaccacgtg
cttgtgacagcctgtgccatgcaggccttccataacctcttccatgccaagcccagccct
agcaccctgtccgcagagctcaacgcccagatcatcacggcattatatgactacgttccc
agtgagaatgatttacagcccttgctggcctggcttaaggtcatggagaaagctcacatc
aaccttgtcaggttgcagcgggacctggggctaggccatcttgctcggttttttggaatt
gcagtaacctgtcttctctcccctcattcacaagtggtggcagctgccacccagaccctc
aaggagatcctgagggagtgtgtggctccacacgttgctgatattggctccgtgacctct
tctgcctcaggccctccccagtacatcgctaagatgttcagggcagtggaagagggccta
acatacagatttcatgcggcctggagctctgtgctgcagctgctgggtgtcttctttgaa
gcttgtggaaagcaggcccatcctgtgatgaagaagtgcctccagtccctgtgtgacctg
cgcctctcccctcacttcccccacacagcagccttagaccaggctgtgggggctgcagtg
accagcatgggaccagaggtggtgttgcaggcggtgcctttggaaatcgatggctctgag
gagactctggatttcccacggagctggctgctgcctgtcatccgcgatcatgttcgggaa
acacgacttgggtttttcaccacttatttcttgcccttggccaccgctcttaagagaaaa
gcaatggacctggctcaggcaggaagtgcagtggagtcgaagatttatgatacgctccag
tggcagatctggaccctcctgcctgggttctgcataagacccacagatgtggctgcctcc
ttcaaaggcctggcccggactctgggcacagctatcagtgaacgcccagacctgagggtc
actgtgtgccaggccctgcgtaccctcatcaccaagggctgtgaagcagaggctgaccgt
gctgaagtgagccgctttgccaaaaacttcctgcccatcctcttcaacctgtatgggcag
cctgttgcagctggagaggcagaagcccctcggcgtgctgtgctggaaaccatcaaaact
tacctcaccataactgagtctcagttggtgaatggcttcctggaaaaagctaccgagaag
gttcttgatcctgccagctctgattttaccagattgtctgtcctggacctggttgtggct
ttggctccttactcagatgaagctgccatcagtaagctatactctaccatccggccctac
cttgagagcaaggtccatggggtacagaagaaggcctaccgcgtgctggaggaggtgtgt
gccagttctcagggccctgcagcccgcttcgtgcaaagccacctggatgacctgaagaag
actctgctggactcactgcagagcacatcctcgcctgctaaaaggccccgtttgaagtgt
ctcatacatattgtgaaaaagctgtcagctgagcacgaggagttcatcgctgccctcatc
ccagaggtgatcctgtgcaccaaggaggtgtcagtgggtgcaaggaagaatgcgttcacc
ctgctggtggagatgggccacgctttcctgcggtttgactccagccaggaagaggctctg
cagcgctaccttgtcctgatctatcctggccttctgggagcggttaccacagtcagttgt
agcattttggctctgacccacctcttgtttgagttcaaagggctgatggggacaagcaca
gtggagcagctcctagagaacgtgtgcctgctgctggcctctcgaacccgtgatgtggtc
aagtctgcactaggcttcatcaaggtggctgtggtggtcatggacgtggtgcaccttgct
aagcatgtgcagctagtgttggaagccatcgggaagttgtcagatgacatgcgacggcac
ttccgcatgaagcttcggaacctgttcatcaagttcattcgcaagtttggattcgagttg
gtgaaggatctgctgcctgcagaataccacaaagtcctggtaaacatcagaaaagcggag
acccgagccaagaagcatcgtgccctgagccaggctgctatggaggaggaagaggaggaa
gaggaagagaagcccgtccagagcaaaggtgacagcattgaggagattttggctgactct
gaggatgaagatgaggaagaagaacgaagccagggcaaggagcagcggaagctggcacga
cagaggagcagggcgtggctgaaggaaggtggtggcgatgagcccctcaatttcttggat
cccaaggtggcccaccgagtccttgccacccaacctgggcctgggcggggcaagaaaaag
gaccatggcttcaagttgagcgctgatggcagactgatcatccgagaggaggaagatgga
gacaaggtggaggaagaagatgtcactaaaggggaagatgaagagatgaccgatgtgatg
gaagatgccagtgtcagaagtaaaaagaagctcaagcggcagagggaggatgaggaggat
gaactggagatcccacctcggtaccaagctggaggctctggcatccatcgccctgtggct
aagaaggctgcgcctggagctgagtacaaggccaagaaggcaaagggtgatgtgaagagg
aagggccgcctggacccctatgcttacgtcccactcaacagaaccaagctcaaccgcagg
aaaaaggtgaagctccagggacagttcaaaggtctggtgaaagctgcccaacggggatcc
caggtgggacacaaactccacagaaaggatcgtcggccctga
DBGET
integrated database retrieval system